This file is indexed.

/usr/include/root/Fit/FitConfig.h is in libroot-math-mathcore-dev 5.34.19+dfsg-1.2.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
// @(#)root/mathcore:$Id$
// Author: L. Moneta Thu Sep 21 16:21:29 2006

/**********************************************************************
 *                                                                    *
 * Copyright (c) 2006  LCG ROOT Math Team, CERN/PH-SFT                *
 *                                                                    *
 *                                                                    *
 **********************************************************************/

// Header file for class FitConfig

#ifndef ROOT_Fit_FitConfig
#define ROOT_Fit_FitConfig


#ifndef ROOT_Fit_ParameterSettings
#include "Fit/ParameterSettings.h"
#endif

#ifndef ROOT_Math_MinimizerOptions
#include "Math/MinimizerOptions.h"
#endif

#ifndef ROOT_Math_IParamFunctionfwd
#include "Math/IParamFunctionfwd.h"
#endif


#include <vector>

namespace ROOT { 

   namespace Math { 

      class Minimizer;
      class MinimizerOptions; 
   }

   namespace Fit { 

      class FitResult;

//___________________________________________________________________________________
/** 
   Class describing the configuration of the fit, options and parameter settings
   using the ROOT::Fit::ParameterSettings class 

   @ingroup FitMain
*/ 
class FitConfig {

public: 

   /** 
      Default constructor
   */ 
   FitConfig (unsigned int npar = 0); 


   /*
     Copy constructor 
    */
   FitConfig(const FitConfig & rhs);

   /** 
      Destructor 
   */ 
   ~FitConfig ();  

   /*
     Assignment operator 
   */
   FitConfig & operator= (const FitConfig & rhs);


   /**
      get the parameter settings for the i-th parameter (const method)
   */
   const ParameterSettings & ParSettings(unsigned int i) const { return fSettings.at(i); }

   /**
      get the parameter settings for the i-th parameter (non-const method)
   */
   ParameterSettings & ParSettings(unsigned int i) { return fSettings.at(i); }

   /**
      get the vector of parameter settings  (const method)
   */
   const std::vector<ROOT::Fit::ParameterSettings> & ParamsSettings() const { return fSettings; }

   /**
      get the vector of parameter settings  (non-const method)
   */
   std::vector<ROOT::Fit::ParameterSettings> & ParamsSettings() { return fSettings; }

   /**
      number of parameters settings 
    */
   unsigned int NPar() const { return fSettings.size(); }

   /**
      set the parameter settings from a model function. 
      Create always new parameter setting list from a given model function  
   */
   void CreateParamsSettings(const ROOT::Math::IParamMultiFunction & func); 

   /**
      set the parameter settings from number of parameters and a vector of values and optionally step values. If there are not existing or number of parameters does not match existing one, create a new parameter setting list. 
   */
   void SetParamsSettings(unsigned int npar, const double * params, const double * vstep = 0); 

   /*
     Set the parameter settings from a vector of parameter settings
   */
   void SetParamsSettings (const std::vector<ROOT::Fit::ParameterSettings>& pars ) { 
      fSettings = pars;
   }


   /*
     Set the parameter settings from a fit Result
   */
   void SetFromFitResult (const FitResult & rhs);



   /**
      create a new minimizer according to chosen configuration
   */
   ROOT::Math::Minimizer * CreateMinimizer(); 



   /**
      access to the minimizer  control parameter (non const method) 
   */
   ROOT::Math::MinimizerOptions & MinimizerOptions()  { return fMinimizerOpts; } 


#ifndef __CINT__   // this method fails on Windows
   /**
      set all the minimizer options using class MinimizerOptions
    */
   void SetMinimizerOptions(const ROOT::Math::MinimizerOptions & minopt); 
#endif

   
   /**
      set minimizer type 
   */
   void SetMinimizer(const char * type, const char * algo = 0) { 
      if (type) fMinimizerOpts.SetMinimizerType(type); 
      if (algo) fMinimizerOpts.SetMinimizerAlgorithm(algo); 
   } 

   /**
      return type of minimizer package
   */
   const std::string & MinimizerType() const { return fMinimizerOpts.MinimizerType(); } 

   /**
      return type of minimizer algorithms 
   */
   const std::string & MinimizerAlgoType() const { return fMinimizerOpts.MinimizerAlgorithm(); }  


   /**
      flag to check if resulting errors are be normalized according to chi2/ndf 
   */
   bool NormalizeErrors() const { return fNormErrors; } 

   ///do analysis for parabolic errors
   bool ParabErrors() const { return fParabErrors; }

   ///do minos errros analysis on the  parameters
   bool MinosErrors() const { return fMinosErrors; }

   ///Update configuration after a fit using the FitResult
   bool UpdateAfterFit() const { return fUpdateAfterFit; } 

   ///Apply Weight correction for error matrix computation
   bool UseWeightCorrection() const { return fWeightCorr; }


   /// return vector of parameter indeces for which the Minos Error will be computed
   const std::vector<unsigned int> & MinosParams() const { return fMinosParams; }

   /**
      set the option to normalize the error on the result  according to chi2/ndf
   */
   void SetNormErrors(bool on = true) { fNormErrors= on; }

   ///set parabolic erros
   void SetParabErrors(bool on = true) { fParabErrors = on; } 

   ///set Minos erros computation to be performed after fitting
   void SetMinosErrors(bool on = true) { fMinosErrors = on; } 

   ///apply the weight correction for error matric computation
   void SetWeightCorrection(bool on = true) { fWeightCorr = on; }

   /// set parameter indeces for running Minos
   /// this can be used for running Minos on a subset of parameters - otherwise is run on all of them 
   /// if MinosErrors() is set 
   void SetMinosErrors(const std::vector<unsigned int> & paramInd ) { 
      fMinosErrors = true; 
      fMinosParams = paramInd; 
   }

   ///Update configuration after a fit using the FitResult
   void SetUpdateAfterFit(bool on = true) { fUpdateAfterFit = on; } 


   /**
      static function to control default minimizer type and algorithm
   */
   static void SetDefaultMinimizer(const char * type, const char * algo = 0); 

 


protected: 


private: 

   bool fNormErrors;       // flag for error normalization
   bool fParabErrors;      // get correct parabolic errors estimate (call Hesse after minimizing)  
   bool fMinosErrors;      // do full error analysis using Minos
   bool fUpdateAfterFit;   // update the configuration after a fit using the result
   bool fWeightCorr;       // apply correction to errors for weights fits 

   std::vector<ROOT::Fit::ParameterSettings> fSettings;  // vector with the parameter settings
   std::vector<unsigned int> fMinosParams;               // vector with the parameter indeces for running Minos

   ROOT::Math::MinimizerOptions fMinimizerOpts;   //minimizer control parameters including name and algo type

}; 

   } // end namespace Fit

} // end namespace ROOT


#endif /* ROOT_Fit_FitConfig */