/usr/include/ASL/num/aslFDAdvectionDiffusion2.h is in libasl-dev 0.1.7-2.
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* Advanced Simulation Library <http://asl.org.il>
*
* Copyright 2015 Avtech Scientific <http://avtechscientific.com>
*
*
* This file is part of Advanced Simulation Library (ASL).
*
* ASL is free software: you can redistribute it and/or modify it
* under the terms of the GNU Affero General Public License as
* published by the Free Software Foundation, version 3 of the License.
*
* ASL is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU Affero General Public License for more details.
*
* You should have received a copy of the GNU Affero General Public License
* along with ASL. If not, see <http://www.gnu.org/licenses/>.
*
*/
#ifndef ASLFDADVECTIONDIFFUSION2_H
#define ASLFDADVECTIONDIFFUSION2_H
#include "aslNumMethod.h"
namespace acl{
class Kernel;
class VectorOfElementsData;
}
namespace asl
{
class VectorTemplate;
template <typename V> class DataWithGhostNodes;
typedef DataWithGhostNodes<acl::VectorOfElementsData> DataWithGhostNodesACLData;
typedef std::shared_ptr<DataWithGhostNodesACLData> SPDataWithGhostNodesACLData;
class AbstractDataWithGhostNodes;
typedef std::shared_ptr<AbstractDataWithGhostNodes> SPAbstractDataWithGhostNodes;
/// Numerical method which computes multicomponent transport processes; \f$O^2(dt)\f$
/**
\ingroup TransportProcesses
\ingroup NumMethods
\f[ \partial_t c_i= D_i \Delta c_i
-\nabla\left(\frac{c_i q}{k} \nabla(\phi+f_2) \right)\f]
where
\param cData corresponds to \f$c_i\f$
\param diffusionCoefficient corresponds to \f$D_i\f$
\param efFactor1 corresponds to \f$k\f$
\param efFactor2 corresponds to \f$f_2\f$
\param efPhi corresponds to \f$\phi\f$
\param efChargeAnd corresponds to \f$q\f$
*/
class FDAdvectionDiffusion2: public NumMethod
{
public:
typedef SPDataWithGhostNodesACLData Data;
typedef SPAbstractDataWithGhostNodes ScalarField;
private:
std::unique_ptr<acl::Kernel> kernel;
std::vector<Data> cData;
std::vector<Data> cInternalData;
bool electricField;
ScalarField efPhi;
ScalarField efFactor1;
ScalarField efFactor2;
std::vector<ScalarField> efChargeAnd;
const VectorTemplate* vectorTemplate;
int t;
std::vector<double> diffusionCoefficient;
public:
FDAdvectionDiffusion2();
FDAdvectionDiffusion2(Data c, double dC, const VectorTemplate* vT);
void setDiffusionCoefficient(double d, unsigned int i=0);
double getDiffusionCoefficient(unsigned int i=0);
void setVectorTemplate(VectorTemplate* vT);
VectorTemplate setVectorTemplate(const VectorTemplate* vT);
void setElectricFieldParameters(ScalarField phi, ScalarField f1, ScalarField f2, ScalarField qAnd);
virtual void init();
virtual void execute();
void addComponent(Data c, double dC);
void addComponent(Data c, double dC, ScalarField qAnd);
};
typedef std::shared_ptr<FDAdvectionDiffusion2> SPFDAdvectionDiffusion2;
} // asl
#endif // ASLFDADVECTIONDIFFUSION2_H
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