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//
// Copyright (C) 2001 - 2016 by the deal.II authors
//
// This file is part of the deal.II library.
//
// The deal.II library is free software; you can use it, redistribute
// it, and/or modify it under the terms of the GNU Lesser General
// Public License as published by the Free Software Foundation; either
// version 2.1 of the License, or (at your option) any later version.
// The full text of the license can be found in the file LICENSE at
// the top level of the deal.II distribution.
//
// ---------------------------------------------------------------------
#ifndef dealii__sparse_direct_h
#define dealii__sparse_direct_h
#include <deal.II/base/config.h>
#include <deal.II/base/exceptions.h>
#include <deal.II/base/subscriptor.h>
#include <deal.II/base/thread_management.h>
#include <deal.II/lac/vector.h>
#include <deal.II/lac/sparse_matrix.h>
#include <deal.II/lac/sparse_matrix_ez.h>
#include <deal.II/lac/block_sparse_matrix.h>
#ifdef DEAL_II_WITH_UMFPACK
# include <umfpack.h>
#endif
#ifndef SuiteSparse_long
# define SuiteSparse_long long int
#endif
DEAL_II_NAMESPACE_OPEN
/**
* This class provides an interface to the sparse direct solver UMFPACK (see
* <a href="http://www.cise.ufl.edu/research/sparse/umfpack">this link</a>).
* UMFPACK is a set of routines for solving non-symmetric sparse linear
* systems, Ax=b, using the Unsymmetric-pattern MultiFrontal method and direct
* sparse LU factorization. Matrices may have symmetric or unsymmetric
* sparsity patterns, and may have unsymmetric entries. The use of this class
* is explained in the
* @ref step_22 "step-22"
* and
* @ref step_29 "step-29"
* tutorial programs.
*
* This matrix class implements the usual interface of preconditioners, that
* is a function initialize(const SparseMatrix<double>&matrix,const
* AdditionalData) for initializing and the whole set of vmult() functions
* common to all matrices. Implemented here are only vmult() and vmult_add(),
* which perform multiplication with the inverse matrix. Furthermore, this
* class provides an older interface, consisting of the functions factorize()
* and solve(). Both interfaces are interchangeable.
*
* @note This class exists if the <a
* href="http://faculty.cse.tamu.edu/davis/suitesparse.html">UMFPACK</a>
* interface was not explicitly disabled during configuration.
*
* @note UMFPACK has its own license, independent of that of deal.II. If you
* want to use the UMFPACK you have to accept that license. It is linked to
* from the deal.II ReadMe file. UMFPACK is included courtesy of its author,
* <a href="http://www.cise.ufl.edu/~davis/">Timothy A. Davis</a>.
*
*
* <h4>Instantiations</h4>
*
* There are instantiations of this class for SparseMatrix<double>,
* SparseMatrix<float>, SparseMatrixEZ<float>, SparseMatrixEZ<double>,
* BlockSparseMatrix<double>, and BlockSparseMatrix<float>.
*
* @ingroup Solvers Preconditioners
*
* @author Wolfgang Bangerth, 2004; extension for full compatibility with
* LinearOperator class: Jean-Paul Pelteret, 2015
*/
class SparseDirectUMFPACK : public Subscriptor
{
public:
/**
* Declare type for container size.
*/
typedef types::global_dof_index size_type;
/**
* Dummy class needed for the usual initialization interface of
* preconditioners.
*/
class AdditionalData
{};
/**
* Constructor. See the documentation of this class for the meaning of the
* parameters to this function.
*/
SparseDirectUMFPACK ();
/**
* Destructor.
*/
~SparseDirectUMFPACK ();
/**
* @name Setting up a sparse factorization
*/
/**
* @{
*/
/**
* This function does nothing. It is only here to provide a interface
* consistent with other sparse direct solvers.
*/
void initialize (const SparsityPattern &sparsity_pattern);
/**
* Factorize the matrix. This function may be called multiple times for
* different matrices, after the object of this class has been initialized
* for a certain sparsity pattern. You may therefore save some computing
* time if you want to invert several matrices with the same sparsity
* pattern. However, note that the bulk of the computing time is actually
* spent in the factorization, so this functionality may not always be of
* large benefit.
*
* In contrast to the other direct solver classes, the initialisation method
* does nothing. Therefore initialise is not automatically called by this
* method, when the initialization step has not been performed yet.
*
* This function copies the contents of the matrix into its own storage; the
* matrix can therefore be deleted after this operation, even if subsequent
* solves are required.
*/
template <class Matrix>
void factorize (const Matrix &matrix);
/**
* Initialize memory and call SparseDirectUMFPACK::factorize.
*/
template <class Matrix>
void initialize(const Matrix &matrix,
const AdditionalData additional_data = AdditionalData());
/**
* @}
*/
/**
* @name Functions that represent the inverse of a matrix
*/
/**
* @{
*/
/**
* Preconditioner interface function. Usually, given the source vector, this
* method returns an approximate solution of <i>Ax = b</i>. As this class
* provides a wrapper to a direct solver, here it is actually the exact
* solution (exact within the range of numerical accuracy of course).
*
* In other words, this function actually multiplies with the exact inverse
* of the matrix, $A^{-1}$.
*/
void vmult (Vector<double> &dst,
const Vector<double> &src) const;
/**
* Same as before, but for block vectors.
*/
void vmult (BlockVector<double> &dst,
const BlockVector<double> &src) const;
/**
* Same as before, but uses the transpose of the matrix, i.e. this function
* multiplies with $A^{-T}$.
*/
void Tvmult (Vector<double> &dst,
const Vector<double> &src) const;
/**
* Same as before, but for block vectors
*/
void Tvmult (BlockVector<double> &dst,
const BlockVector<double> &src) const;
/**
* Return the dimension of the codomain (or range) space. To remember: the
* matrix is of dimension $m \times n$.
*/
size_type m () const;
/**
* Return the dimension of the domain space. To remember: the matrix is of
* dimension $m \times n$.
*/
size_type n () const;
/**
* @}
*/
/**
* @name Functions that solve linear systems
*/
/**
* @{
*/
/**
* Solve for a certain right hand side vector. This function may be called
* multiple times for different right hand side vectors after the matrix has
* been factorized. This yields a big saving in computing time, since the
* actual solution is fast, compared to the factorization of the matrix.
*
* The solution will be returned in place of the right hand side vector.
*
* If the factorization has not happened before, strange things will happen.
* Note that we can't actually call the factorize() function from here if it
* has not yet been called, since we have no access to the actual matrix.
*
* If @p transpose is set to true this function solves for the transpose of
* the matrix, i.e. $x=A^{-T}b$.
*/
void solve (Vector<double> &rhs_and_solution, bool transpose = false) const;
/**
* Same as before, but for block vectors.
*/
void solve (BlockVector<double> &rhs_and_solution, bool transpose = false) const;
/**
* Call the two functions factorize() and solve() in that order, i.e.
* perform the whole solution process for the given right hand side vector.
*
* The solution will be returned in place of the right hand side vector.
*/
template <class Matrix>
void solve (const Matrix &matrix,
Vector<double> &rhs_and_solution,
bool transpose = false);
/**
* Same as before, but for block vectors.
*/
template <class Matrix>
void solve (const Matrix &matrix,
BlockVector<double> &rhs_and_solution,
bool transpose = false);
/**
* @}
*/
/**
* One of the UMFPack routines threw an error. The error code is included in
* the output and can be looked up in the UMFPack user manual. The name of
* the routine is included for reference.
*/
DeclException2 (ExcUMFPACKError, char *, int,
<< "UMFPACK routine " << arg1
<< " returned error status " << arg2 << "."
<< "\n\n"
<< ("A complete list of error codes can be found in the file "
"<bundled/umfpack/UMFPACK/Include/umfpack.h>."
"\n\n"
"That said, the two most common errors that can happen are "
"that your matrix cannot be factorized because it is "
"rank deficient, and that UMFPACK runs out of memory "
"because your problem is too large."
"\n\n"
"The first of these cases most often happens if you "
"forget terms in your bilinear form necessary to ensure "
"that the matrix has full rank, or if your equation has a "
"spatially variable coefficient (or nonlinearity) that is "
"supposed to be strictly positive but, for whatever "
"reasons, is negative or zero. In either case, you probably "
"want to check your assembly procedure. Similarly, a "
"matrix can be rank deficient if you forgot to apply the "
"appropriate boundary conditions. For example, the "
"Laplace equation without boundary conditions has a "
"single zero eigenvalue and its rank is therefore "
"deficient by one."
"\n\n"
"The other common situation is that you run out of memory."
"On a typical laptop or desktop, it should easily be possible "
"to solve problems with 100,000 unknowns in 2d. If you are "
"solving problems with many more unknowns than that, in "
"particular if you are in 3d, then you may be running out "
"of memory and you will need to consider iterative "
"solvers instead of the direct solver employed by "
"UMFPACK."));
private:
/**
* The dimension of the range space.
*/
size_type _m;
/**
* The dimension of the domain space.
*/
size_type _n;
/**
* The UMFPACK routines allocate objects in which they store information
* about symbolic and numeric values of the decomposition. The actual data
* type of these objects is opaque, and only passed around as void pointers.
*/
void *symbolic_decomposition;
void *numeric_decomposition;
/**
* Free all memory that hasn't been freed yet.
*/
void clear ();
/**
* Make sure that the arrays Ai and Ap are sorted in each row. UMFPACK wants
* it this way. We need to have three versions of this function, one for the
* usual SparseMatrix, one for the SparseMatrixEZ, and one for the
* BlockSparseMatrix classes
*/
template <typename number>
void sort_arrays (const SparseMatrixEZ<number> &);
template <typename number>
void sort_arrays (const SparseMatrix<number> &);
template <typename number>
void sort_arrays (const BlockSparseMatrix<number> &);
/**
* The arrays in which we store the data for the solver. SuiteSparse_long
* has to be used here for Windows 64 build, if we used only long int,
* compilation would fail.
*/
std::vector<SuiteSparse_long> Ap;
std::vector<SuiteSparse_long> Ai;
std::vector<double> Ax;
/**
* Control and info arrays for the solver routines.
*/
std::vector<double> control;
};
DEAL_II_NAMESPACE_CLOSE
#endif // dealii__sparse_direct_h
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