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/usr/lib/x86_64-linux-gnu/pkgconfig/nfft3.pc is in libnfft3-dev 3.3.2-2.

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prefix=/usr
exec_prefix=${prefix}
libdir=${prefix}/lib/x86_64-linux-gnu
includedir=${prefix}/include

Name: NFFT
Description: Nonuniform fast Fourier transform library
Version: 3.3.2alpha
Requires: fftw3
Libs: -L${libdir} -lnfft3
Cflags: -I${includedir}