/usr/lib/python2.7/dist-packages/pymol/wizarding.py is in pymol 1.8.4.0+dfsg-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
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#B* This file contains source code for the PyMOL computer program
#C* Copyright (c) Schrodinger, LLC.
#D* -------------------------------------------------------------------
#E* It is unlawful to modify or remove this copyright notice.
#F* -------------------------------------------------------------------
#G* Please see the accompanying LICENSE file for further information.
#H* -------------------------------------------------------------------
#I* Additional authors of this source file include:
#-*
#-*
#-*
#Z* -------------------------------------------------------------------
from __future__ import print_function
if __name__=='pymol.wizarding':
import pymol
import sys
cmd = __import__("sys").modules["pymol.cmd"]
from .cmd import _cmd,lock,unlock,Shortcut,QuietException,_raising, \
_feedback,fb_module,fb_mask, \
DEFAULT_ERROR, DEFAULT_SUCCESS, _raising, is_ok, is_error
try:
import cPickle
except ImportError:
import pickle as cPickle
import traceback
class WizardError(Exception):
pass
def _wizard(name,arg,kwd,replace,_self=cmd):
r = DEFAULT_ERROR
from . import wizard
try:
full_name = 'pymol.wizard.'+name
__import__(full_name)
except ImportError:
print("Error: Sorry, couldn't import the '"+name+"' wizard.")
else:
mod_obj = sys.modules[full_name]
if mod_obj:
oname = name.capitalize()
r = DEFAULT_SUCCESS
if hasattr(mod_obj,oname):
kwd['_self']=_self
try:
wiz = getattr(mod_obj,oname)(*arg, **kwd)
except WizardError as e:
from pymol.wizard.message import Message
wiz = Message("Error: %s" % e.message, _self=_self)
if wiz:
_self.set_wizard(wiz,replace)
_self.do("_ refresh_wizard")
else:
print("Error: Sorry, couldn't find the '"+oname+"' class.")
else:
print("Error: Sorry, couldn't import the '"+name+"' wizard.")
return r
def wizard(name=None,*arg,**kwd):
'''
DESCRIPTION
"wizard" launches on of the built-in wizards. There are special
Python scripts which work with PyMOL in order to obtain direct user
interaction and easily peform complicated tasks.
USAGE
wizard name
PYMOL API
cmd.wizard(string name)
EXAMPLE
wizard distance # launches the distance measurement wizard
'''
_self = kwd.get('_self',cmd)
r = DEFAULT_ERROR
if name==None:
_self.set_wizard()
r = DEFAULT_SUCCESS
else:
name = str(name)
if name.lower() == 'distance': # legacy compatibility
name = 'measurement'
r = _wizard(name,arg,kwd,0,_self=_self)
if _self._raising(r,_self): raise pymol.CmdException
return r
def replace_wizard(name=None,*arg,**kwd):
'''
DESCRIPTION
"replace_wizard" is an unsupported internal command.
'''
_self = kwd.get('_self',cmd)
r = DEFAULT_ERROR
if name==None:
_self.set_wizard()
r = DEFAULT_SUCCESS
else:
r = _wizard(name,arg,kwd,1,_self=_self)
if _self._raising(r,_self): raise pymol.CmdException
return r
def set_wizard(wizard=None,replace=0,_self=cmd): # INTERNAL
r = DEFAULT_ERROR
try:
_self.lock(_self)
r = _cmd.set_wizard(_self._COb,wizard,replace)
finally:
_self.unlock(r,_self)
if _self._raising(r,_self): raise pymol.CmdException
return r
def set_wizard_stack(stack=[],_self=cmd): # INTERNAL
r = DEFAULT_ERROR
try:
_self.lock(_self)
r = _cmd.set_wizard_stack(_self._COb,stack)
finally:
_self.unlock(r,_self)
if _self._raising(r,_self): raise pymol.CmdException
return r
def refresh_wizard(_self=cmd): # INTERNAL
'''
DESCRIPTION
"refresh_wizard" is in unsupported internal command.
'''
r = DEFAULT_ERROR
try:
_self.lock(_self)
r = _cmd.refresh_wizard(_self._COb)
finally:
_self.unlock(r,_self)
if _self._raising(r,_self): raise pymol.CmdException
return r
def dirty_wizard(_self=cmd): # INTERNAL
r = DEFAULT_ERROR
try:
_self.lock(_self)
r = _cmd.dirty_wizard(_self._COb)
finally:
_self.unlock(r,_self)
if _self._raising(r,_self): raise pymol.CmdException
return r
def get_wizard(_self=cmd): # INTERNAL
r = DEFAULT_ERROR
try:
_self.lock(_self)
r = _cmd.get_wizard(_self._COb)
finally:
_self.unlock(r,_self)
if _self._raising(r,_self): raise pymol.CmdException
return r
def get_wizard_stack(_self=cmd): # INTERNAL
r = DEFAULT_ERROR
try:
_self.lock(_self)
r = _cmd.get_wizard_stack(_self._COb)
finally:
_self.unlock(r,_self)
if _self._raising(r,_self): raise pymol.CmdException
return r
def session_save_wizard(session,_self=cmd):
# double-pickle so that session file is class-independent
stack = cmd.get_wizard_stack(_self=_self)
session['wizard']=cPickle.dumps(stack,1)
return 1
def session_restore_wizard(session,_self=cmd):
if session!=None:
version = session.get('version', 0)
if 'wizard' in session:
try:
wizards = cPickle.loads(session['wizard'])
for wiz in wizards:
wiz.cmd = _self
wiz.migrate_session(version)
_self.set_wizard_stack(wizards,_self=_self)
except Exception as e:
print(e)
print("Session-Warning: unable to restore wizard.")
return 1
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