/usr/lib/python2.7/dist-packages/dolfin_utils/pjobs/slurm.py is in python-dolfin 2016.2.0-2.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 | # -*- coding: utf-8 -*-
#!/usr/bin/env python
# Copyright (C) 2013 Johannes Ring
#
# This file is part of DOLFIN.
#
# DOLFIN is free software: you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
#
# DOLFIN is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU Lesser General Public License for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with DOLFIN. If not, see <http://www.gnu.org/licenses/>.
from __future__ import print_function
template = """#!/bin/bash
%(sbatch)s
%(paths)s
%(setup)s
%(job)s
"""
def job_script(job, jobname, nodes, ppn, walltime, mem, vmem, workdir, \
email, paths, setup, keep_environment, queue, parallel_environment):
"""
Generate a slurm specific job script.
"""
sbatch = "#SBATCH --job-name=" + jobname
sbatch += " --time=%d:00:00" % walltime
sbatch += " --ntasks=" + str(nodes)
sbatch += " --cpus-per-task=" + str(ppn)
if mem:
sbatch += " --mem-per-cpu=" + mem
if email:
sbatch += " --mail-user=" + email
if keep_environment:
sbatch += " --get-user-env"
# Issue warnings on not supported arguments
if vmem:
print("Warning: 'vmem' is not supported for the 'slurm' backend")
if queue:
print("Warning: 'queue' is not supported for the 'slurm' backend")
if parallel_environment:
print("Warning: 'parallel_environment' is not supported for the 'slurm' backend")
args = dict(sbatch=sbatch,
workdir=workdir,
paths=paths,
setup=setup,
job=job)
return template % args
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