/usr/share/perl5/Bio/Chado/Schema/Result/Cv/CvtermRelationship.pm is in libbio-chado-schema-perl 0.20000-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 | package Bio::Chado::Schema::Result::Cv::CvtermRelationship;
BEGIN {
$Bio::Chado::Schema::Result::Cv::CvtermRelationship::AUTHORITY = 'cpan:RBUELS';
}
{
$Bio::Chado::Schema::Result::Cv::CvtermRelationship::VERSION = '0.20000';
}
# Created by DBIx::Class::Schema::Loader
# DO NOT MODIFY THE FIRST PART OF THIS FILE
use strict;
use warnings;
use base 'DBIx::Class::Core';
=head1 NAME
Bio::Chado::Schema::Result::Cv::CvtermRelationship
=head1 DESCRIPTION
A relationship linking two
cvterms. Each cvterm_relationship constitutes an edge in the graph
defined by the collection of cvterms and cvterm_relationships. The
meaning of the cvterm_relationship depends on the definition of the
cvterm R refered to by type_id. However, in general the definitions
are such that the statement "all SUBJs REL some OBJ" is true. The
cvterm_relationship statement is about the subject, not the
object. For example "insect wing part_of thorax".
=cut
__PACKAGE__->table("cvterm_relationship");
=head1 ACCESSORS
=head2 cvterm_relationship_id
data_type: 'integer'
is_auto_increment: 1
is_nullable: 0
sequence: 'cvterm_relationship_cvterm_relationship_id_seq'
=head2 type_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
The nature of the
relationship between subject and object. Note that relations are also
housed in the cvterm table, typically from the OBO relationship
ontology, although other relationship types are allowed.
=head2 subject_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
The subject of
the subj-predicate-obj sentence. The cvterm_relationship is about the
subject. In a graph, this typically corresponds to the child node.
=head2 object_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
The object of the
subj-predicate-obj sentence. The cvterm_relationship refers to the
object. In a graph, this typically corresponds to the parent node.
=cut
__PACKAGE__->add_columns(
"cvterm_relationship_id",
{
data_type => "integer",
is_auto_increment => 1,
is_nullable => 0,
sequence => "cvterm_relationship_cvterm_relationship_id_seq",
},
"type_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
"subject_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
"object_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
);
__PACKAGE__->set_primary_key("cvterm_relationship_id");
__PACKAGE__->add_unique_constraint(
"cvterm_relationship_c1",
["subject_id", "object_id", "type_id"],
);
=head1 RELATIONS
=head2 type
Type: belongs_to
Related object: L<Bio::Chado::Schema::Result::Cv::Cvterm>
=cut
__PACKAGE__->belongs_to(
"type",
"Bio::Chado::Schema::Result::Cv::Cvterm",
{ cvterm_id => "type_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
=head2 object
Type: belongs_to
Related object: L<Bio::Chado::Schema::Result::Cv::Cvterm>
=cut
__PACKAGE__->belongs_to(
"object",
"Bio::Chado::Schema::Result::Cv::Cvterm",
{ cvterm_id => "object_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
=head2 subject
Type: belongs_to
Related object: L<Bio::Chado::Schema::Result::Cv::Cvterm>
=cut
__PACKAGE__->belongs_to(
"subject",
"Bio::Chado::Schema::Result::Cv::Cvterm",
{ cvterm_id => "subject_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
# Created by DBIx::Class::Schema::Loader v0.07010 @ 2011-03-16 23:09:58
# DO NOT MODIFY THIS OR ANYTHING ABOVE! md5sum:lcPHP3VbVNwBdAGgnG+7hg
# You can replace this text with custom content, and it will be preserved on regeneration
1;
|