/usr/share/perl5/Bio/Chado/Schema/Result/Library/LibrarySynonym.pm is in libbio-chado-schema-perl 0.20000-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
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BEGIN {
$Bio::Chado::Schema::Result::Library::LibrarySynonym::AUTHORITY = 'cpan:RBUELS';
}
{
$Bio::Chado::Schema::Result::Library::LibrarySynonym::VERSION = '0.20000';
}
# Created by DBIx::Class::Schema::Loader
# DO NOT MODIFY THE FIRST PART OF THIS FILE
use strict;
use warnings;
use base 'DBIx::Class::Core';
=head1 NAME
Bio::Chado::Schema::Result::Library::LibrarySynonym
=cut
__PACKAGE__->table("library_synonym");
=head1 ACCESSORS
=head2 library_synonym_id
data_type: 'integer'
is_auto_increment: 1
is_nullable: 0
sequence: 'library_synonym_library_synonym_id_seq'
=head2 synonym_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
=head2 library_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
=head2 pub_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
The pub_id link is for
relating the usage of a given synonym to the publication in which it was used.
=head2 is_current
data_type: 'boolean'
default_value: true
is_nullable: 0
The is_current bit indicates whether the linked synonym is the current -official- symbol for the linked library.
=head2 is_internal
data_type: 'boolean'
default_value: false
is_nullable: 0
Typically a synonym
exists so that somebody querying the database with an obsolete name
can find the object they are looking for under its current name. If
the synonym has been used publicly and deliberately (e.g. in a paper), it my also be listed in reports as a synonym. If the synonym was not used deliberately (e.g., there was a typo which went public), then the is_internal bit may be set to "true" so that it is known that the synonym is "internal" and should be queryable but should not be listed in reports as a valid synonym.
=cut
__PACKAGE__->add_columns(
"library_synonym_id",
{
data_type => "integer",
is_auto_increment => 1,
is_nullable => 0,
sequence => "library_synonym_library_synonym_id_seq",
},
"synonym_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
"library_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
"pub_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
"is_current",
{ data_type => "boolean", default_value => \"true", is_nullable => 0 },
"is_internal",
{ data_type => "boolean", default_value => \"false", is_nullable => 0 },
);
__PACKAGE__->set_primary_key("library_synonym_id");
__PACKAGE__->add_unique_constraint("library_synonym_c1", ["synonym_id", "library_id", "pub_id"]);
=head1 RELATIONS
=head2 pub
Type: belongs_to
Related object: L<Bio::Chado::Schema::Result::Pub::Pub>
=cut
__PACKAGE__->belongs_to(
"pub",
"Bio::Chado::Schema::Result::Pub::Pub",
{ pub_id => "pub_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
=head2 library
Type: belongs_to
Related object: L<Bio::Chado::Schema::Result::Library::Library>
=cut
__PACKAGE__->belongs_to(
"library",
"Bio::Chado::Schema::Result::Library::Library",
{ library_id => "library_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
=head2 synonym
Type: belongs_to
Related object: L<Bio::Chado::Schema::Result::Sequence::Synonym>
=cut
__PACKAGE__->belongs_to(
"synonym",
"Bio::Chado::Schema::Result::Sequence::Synonym",
{ synonym_id => "synonym_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
# Created by DBIx::Class::Schema::Loader v0.07010 @ 2011-03-16 23:09:59
# DO NOT MODIFY THIS OR ANYTHING ABOVE! md5sum:xgRXrLhsUuPfjabjNYc08A
# You can replace this text with custom content, and it will be preserved on regeneration
1;
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