/usr/share/perl5/Bio/Chado/Schema/Result/Mage/Protocol.pm is in libbio-chado-schema-perl 0.20000-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
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BEGIN {
$Bio::Chado::Schema::Result::Mage::Protocol::AUTHORITY = 'cpan:RBUELS';
}
{
$Bio::Chado::Schema::Result::Mage::Protocol::VERSION = '0.20000';
}
# Created by DBIx::Class::Schema::Loader
# DO NOT MODIFY THE FIRST PART OF THIS FILE
use strict;
use warnings;
use base 'DBIx::Class::Core';
=head1 NAME
Bio::Chado::Schema::Result::Mage::Protocol - Procedural notes on how data was prepared and processed.
=cut
__PACKAGE__->table("protocol");
=head1 ACCESSORS
=head2 protocol_id
data_type: 'integer'
is_auto_increment: 1
is_nullable: 0
sequence: 'protocol_protocol_id_seq'
=head2 type_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
=head2 pub_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 1
=head2 dbxref_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 1
=head2 name
data_type: 'text'
is_nullable: 0
=head2 uri
data_type: 'text'
is_nullable: 1
=head2 protocoldescription
data_type: 'text'
is_nullable: 1
=head2 hardwaredescription
data_type: 'text'
is_nullable: 1
=head2 softwaredescription
data_type: 'text'
is_nullable: 1
=cut
__PACKAGE__->add_columns(
"protocol_id",
{
data_type => "integer",
is_auto_increment => 1,
is_nullable => 0,
sequence => "protocol_protocol_id_seq",
},
"type_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
"pub_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 1 },
"dbxref_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 1 },
"name",
{ data_type => "text", is_nullable => 0 },
"uri",
{ data_type => "text", is_nullable => 1 },
"protocoldescription",
{ data_type => "text", is_nullable => 1 },
"hardwaredescription",
{ data_type => "text", is_nullable => 1 },
"softwaredescription",
{ data_type => "text", is_nullable => 1 },
);
__PACKAGE__->set_primary_key("protocol_id");
__PACKAGE__->add_unique_constraint("protocol_c1", ["name"]);
=head1 RELATIONS
=head2 acquisitions
Type: has_many
Related object: L<Bio::Chado::Schema::Result::Mage::Acquisition>
=cut
__PACKAGE__->has_many(
"acquisitions",
"Bio::Chado::Schema::Result::Mage::Acquisition",
{ "foreign.protocol_id" => "self.protocol_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
=head2 arraydesigns
Type: has_many
Related object: L<Bio::Chado::Schema::Result::Mage::Arraydesign>
=cut
__PACKAGE__->has_many(
"arraydesigns",
"Bio::Chado::Schema::Result::Mage::Arraydesign",
{ "foreign.protocol_id" => "self.protocol_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
=head2 assays
Type: has_many
Related object: L<Bio::Chado::Schema::Result::Mage::Assay>
=cut
__PACKAGE__->has_many(
"assays",
"Bio::Chado::Schema::Result::Mage::Assay",
{ "foreign.protocol_id" => "self.protocol_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
=head2 dbxref
Type: belongs_to
Related object: L<Bio::Chado::Schema::Result::General::Dbxref>
=cut
__PACKAGE__->belongs_to(
"dbxref",
"Bio::Chado::Schema::Result::General::Dbxref",
{ dbxref_id => "dbxref_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
join_type => "LEFT",
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
=head2 pub
Type: belongs_to
Related object: L<Bio::Chado::Schema::Result::Pub::Pub>
=cut
__PACKAGE__->belongs_to(
"pub",
"Bio::Chado::Schema::Result::Pub::Pub",
{ pub_id => "pub_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
join_type => "LEFT",
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
=head2 type
Type: belongs_to
Related object: L<Bio::Chado::Schema::Result::Cv::Cvterm>
=cut
__PACKAGE__->belongs_to(
"type",
"Bio::Chado::Schema::Result::Cv::Cvterm",
{ cvterm_id => "type_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
=head2 protocolparams
Type: has_many
Related object: L<Bio::Chado::Schema::Result::Mage::Protocolparam>
=cut
__PACKAGE__->has_many(
"protocolparams",
"Bio::Chado::Schema::Result::Mage::Protocolparam",
{ "foreign.protocol_id" => "self.protocol_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
=head2 quantifications
Type: has_many
Related object: L<Bio::Chado::Schema::Result::Mage::Quantification>
=cut
__PACKAGE__->has_many(
"quantifications",
"Bio::Chado::Schema::Result::Mage::Quantification",
{ "foreign.protocol_id" => "self.protocol_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
=head2 treatments
Type: has_many
Related object: L<Bio::Chado::Schema::Result::Mage::Treatment>
=cut
__PACKAGE__->has_many(
"treatments",
"Bio::Chado::Schema::Result::Mage::Treatment",
{ "foreign.protocol_id" => "self.protocol_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
# Created by DBIx::Class::Schema::Loader v0.07010 @ 2011-03-16 23:09:59
# DO NOT MODIFY THIS OR ANYTHING ABOVE! md5sum:OYitJJLN+EI4VnlqDp7gsw
# You can replace this text with custom content, and it will be preserved on regeneration
1;
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