/usr/share/perl5/Bio/Chado/Schema/Result/Map/Featurerange.pm is in libbio-chado-schema-perl 0.20000-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
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BEGIN {
$Bio::Chado::Schema::Result::Map::Featurerange::AUTHORITY = 'cpan:RBUELS';
}
{
$Bio::Chado::Schema::Result::Map::Featurerange::VERSION = '0.20000';
}
# Created by DBIx::Class::Schema::Loader
# DO NOT MODIFY THE FIRST PART OF THIS FILE
use strict;
use warnings;
use base 'DBIx::Class::Core';
=head1 NAME
Bio::Chado::Schema::Result::Map::Featurerange
=head1 DESCRIPTION
In cases where the start and end of a mapped feature is a range, leftendf and rightstartf are populated. leftstartf_id, leftendf_id, rightstartf_id, rightendf_id are the ids of features with respect to which the feature is being mapped. These may be cytological bands.
=cut
__PACKAGE__->table("featurerange");
=head1 ACCESSORS
=head2 featurerange_id
data_type: 'integer'
is_auto_increment: 1
is_nullable: 0
sequence: 'featurerange_featurerange_id_seq'
=head2 featuremap_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
featuremap_id is the id of the feature being mapped.
=head2 feature_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
=head2 leftstartf_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
=head2 leftendf_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 1
=head2 rightstartf_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 1
=head2 rightendf_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
=head2 rangestr
data_type: 'varchar'
is_nullable: 1
size: 255
=cut
__PACKAGE__->add_columns(
"featurerange_id",
{
data_type => "integer",
is_auto_increment => 1,
is_nullable => 0,
sequence => "featurerange_featurerange_id_seq",
},
"featuremap_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
"feature_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
"leftstartf_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
"leftendf_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 1 },
"rightstartf_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 1 },
"rightendf_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
"rangestr",
{ data_type => "varchar", is_nullable => 1, size => 255 },
);
__PACKAGE__->set_primary_key("featurerange_id");
=head1 RELATIONS
=head2 featuremap
Type: belongs_to
Related object: L<Bio::Chado::Schema::Result::Map::Featuremap>
=cut
__PACKAGE__->belongs_to(
"featuremap",
"Bio::Chado::Schema::Result::Map::Featuremap",
{ featuremap_id => "featuremap_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
=head2 leftendf
Type: belongs_to
Related object: L<Bio::Chado::Schema::Result::Sequence::Feature>
=cut
__PACKAGE__->belongs_to(
"leftendf",
"Bio::Chado::Schema::Result::Sequence::Feature",
{ feature_id => "leftendf_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
join_type => "LEFT",
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
=head2 rightstartf
Type: belongs_to
Related object: L<Bio::Chado::Schema::Result::Sequence::Feature>
=cut
__PACKAGE__->belongs_to(
"rightstartf",
"Bio::Chado::Schema::Result::Sequence::Feature",
{ feature_id => "rightstartf_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
join_type => "LEFT",
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
=head2 rightendf
Type: belongs_to
Related object: L<Bio::Chado::Schema::Result::Sequence::Feature>
=cut
__PACKAGE__->belongs_to(
"rightendf",
"Bio::Chado::Schema::Result::Sequence::Feature",
{ feature_id => "rightendf_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
=head2 leftstartf
Type: belongs_to
Related object: L<Bio::Chado::Schema::Result::Sequence::Feature>
=cut
__PACKAGE__->belongs_to(
"leftstartf",
"Bio::Chado::Schema::Result::Sequence::Feature",
{ feature_id => "leftstartf_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
=head2 feature
Type: belongs_to
Related object: L<Bio::Chado::Schema::Result::Sequence::Feature>
=cut
__PACKAGE__->belongs_to(
"feature",
"Bio::Chado::Schema::Result::Sequence::Feature",
{ feature_id => "feature_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
# Created by DBIx::Class::Schema::Loader v0.07010 @ 2011-03-16 23:09:59
# DO NOT MODIFY THIS OR ANYTHING ABOVE! md5sum:7AFKlnRnIayzBusw0IrRvA
# You can replace this text with custom content, and it will be preserved on regeneration
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