/usr/share/perl5/Bio/Chado/Schema/Result/Sequence/FeatureCvtermprop.pm is in libbio-chado-schema-perl 0.20000-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 | package Bio::Chado::Schema::Result::Sequence::FeatureCvtermprop;
BEGIN {
$Bio::Chado::Schema::Result::Sequence::FeatureCvtermprop::AUTHORITY = 'cpan:RBUELS';
}
{
$Bio::Chado::Schema::Result::Sequence::FeatureCvtermprop::VERSION = '0.20000';
}
# Created by DBIx::Class::Schema::Loader
# DO NOT MODIFY THE FIRST PART OF THIS FILE
use strict;
use warnings;
use base 'DBIx::Class::Core';
=head1 NAME
Bio::Chado::Schema::Result::Sequence::FeatureCvtermprop
=head1 DESCRIPTION
Extensible properties for
feature to cvterm associations. Examples: GO evidence codes;
qualifiers; metadata such as the date on which the entry was curated
and the source of the association. See the featureprop table for
meanings of type_id, value and rank.
=cut
__PACKAGE__->table("feature_cvtermprop");
=head1 ACCESSORS
=head2 feature_cvtermprop_id
data_type: 'integer'
is_auto_increment: 1
is_nullable: 0
sequence: 'feature_cvtermprop_feature_cvtermprop_id_seq'
=head2 feature_cvterm_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
=head2 type_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
The name of the
property/slot is a cvterm. The meaning of the property is defined in
that cvterm. cvterms may come from the OBO evidence code cv.
=head2 value
data_type: 'text'
is_nullable: 1
The value of the
property, represented as text. Numeric values are converted to their
text representation. This is less efficient than using native database
types, but is easier to query.
=head2 rank
data_type: 'integer'
default_value: 0
is_nullable: 0
Property-Value
ordering. Any feature_cvterm can have multiple values for any particular
property type - these are ordered in a list using rank, counting from
zero. For properties that are single-valued rather than multi-valued,
the default 0 value should be used.
=cut
__PACKAGE__->add_columns(
"feature_cvtermprop_id",
{
data_type => "integer",
is_auto_increment => 1,
is_nullable => 0,
sequence => "feature_cvtermprop_feature_cvtermprop_id_seq",
},
"feature_cvterm_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
"type_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
"value",
{ data_type => "text", is_nullable => 1 },
"rank",
{ data_type => "integer", default_value => 0, is_nullable => 0 },
);
__PACKAGE__->set_primary_key("feature_cvtermprop_id");
__PACKAGE__->add_unique_constraint(
"feature_cvtermprop_c1",
["feature_cvterm_id", "type_id", "rank"],
);
=head1 RELATIONS
=head2 type
Type: belongs_to
Related object: L<Bio::Chado::Schema::Result::Cv::Cvterm>
=cut
__PACKAGE__->belongs_to(
"type",
"Bio::Chado::Schema::Result::Cv::Cvterm",
{ cvterm_id => "type_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
=head2 feature_cvterm
Type: belongs_to
Related object: L<Bio::Chado::Schema::Result::Sequence::FeatureCvterm>
=cut
__PACKAGE__->belongs_to(
"feature_cvterm",
"Bio::Chado::Schema::Result::Sequence::FeatureCvterm",
{ feature_cvterm_id => "feature_cvterm_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
# Created by DBIx::Class::Schema::Loader v0.07010 @ 2011-03-16 23:09:58
# DO NOT MODIFY THIS OR ANYTHING ABOVE! md5sum:z6Lu6SMX+p2zFciHmVMWAg
# You can replace this text with custom content, and it will be preserved on regeneration
1;
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