/usr/share/perl5/Bio/Chado/Schema/Result/Sequence/Synonym.pm is in libbio-chado-schema-perl 0.20000-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 | package Bio::Chado::Schema::Result::Sequence::Synonym;
BEGIN {
$Bio::Chado::Schema::Result::Sequence::Synonym::AUTHORITY = 'cpan:RBUELS';
}
{
$Bio::Chado::Schema::Result::Sequence::Synonym::VERSION = '0.20000';
}
# Created by DBIx::Class::Schema::Loader
# DO NOT MODIFY THE FIRST PART OF THIS FILE
use strict;
use warnings;
use base 'DBIx::Class::Core';
=head1 NAME
Bio::Chado::Schema::Result::Sequence::Synonym
=head1 DESCRIPTION
A synonym for a feature. One feature can have multiple synonyms, and the same synonym can apply to multiple features.
=cut
__PACKAGE__->table("synonym");
=head1 ACCESSORS
=head2 synonym_id
data_type: 'integer'
is_auto_increment: 1
is_nullable: 0
sequence: 'synonym_synonym_id_seq'
=head2 name
data_type: 'varchar'
is_nullable: 0
size: 255
The synonym itself. Should be human-readable machine-searchable ascii text.
=head2 type_id
data_type: 'integer'
is_foreign_key: 1
is_nullable: 0
Types would be symbol and fullname for now.
=head2 synonym_sgml
data_type: 'varchar'
is_nullable: 0
size: 255
The fully specified synonym, with any non-ascii characters encoded in SGML.
=cut
__PACKAGE__->add_columns(
"synonym_id",
{
data_type => "integer",
is_auto_increment => 1,
is_nullable => 0,
sequence => "synonym_synonym_id_seq",
},
"name",
{ data_type => "varchar", is_nullable => 0, size => 255 },
"type_id",
{ data_type => "integer", is_foreign_key => 1, is_nullable => 0 },
"synonym_sgml",
{ data_type => "varchar", is_nullable => 0, size => 255 },
);
__PACKAGE__->set_primary_key("synonym_id");
__PACKAGE__->add_unique_constraint("synonym_c1", ["name", "type_id"]);
=head1 RELATIONS
=head2 cell_line_synonyms
Type: has_many
Related object: L<Bio::Chado::Schema::Result::CellLine::CellLineSynonym>
=cut
__PACKAGE__->has_many(
"cell_line_synonyms",
"Bio::Chado::Schema::Result::CellLine::CellLineSynonym",
{ "foreign.synonym_id" => "self.synonym_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
=head2 feature_synonyms
Type: has_many
Related object: L<Bio::Chado::Schema::Result::Sequence::FeatureSynonym>
=cut
__PACKAGE__->has_many(
"feature_synonyms",
"Bio::Chado::Schema::Result::Sequence::FeatureSynonym",
{ "foreign.synonym_id" => "self.synonym_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
=head2 library_synonyms
Type: has_many
Related object: L<Bio::Chado::Schema::Result::Library::LibrarySynonym>
=cut
__PACKAGE__->has_many(
"library_synonyms",
"Bio::Chado::Schema::Result::Library::LibrarySynonym",
{ "foreign.synonym_id" => "self.synonym_id" },
{ cascade_copy => 0, cascade_delete => 0 },
);
=head2 type
Type: belongs_to
Related object: L<Bio::Chado::Schema::Result::Cv::Cvterm>
=cut
__PACKAGE__->belongs_to(
"type",
"Bio::Chado::Schema::Result::Cv::Cvterm",
{ cvterm_id => "type_id" },
{
cascade_copy => 0,
cascade_delete => 0,
is_deferrable => 1,
on_delete => "CASCADE",
on_update => "CASCADE",
},
);
# Created by DBIx::Class::Schema::Loader v0.07010 @ 2011-03-16 23:09:59
# DO NOT MODIFY THIS OR ANYTHING ABOVE! md5sum:Ajt425W/w/2TgCUWIsvTAw
=head1 MANY-TO-MANY RELATIONSHIPS
=head2 features
Type: many_to_many
Related object: Bio::Chado::Schema::Result::Sequence::Feature
=cut
__PACKAGE__->many_to_many
(
'features',
'feature_synonyms' => 'feature',
);
# You can replace this text with custom content, and it will be preserved on regeneration
1;
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