/usr/include/pbseq/alignment/utils/FileOfFileNames.hpp is in libblasr-dev 0~20161219-2.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 | #ifndef _BLASR_FILE_OF_FILE_NAMES_HPP_
#define _BLASR_FILE_OF_FILE_NAMES_HPP_
#include <iostream>
#include <string>
#include <vector>
#include <fstream>
#include "../../pbdata/utils.hpp"
class FileOfFileNames {
public:
static void StoreFileOrFileList(std::string fileName,
std::vector<std::string> &fofnList);
static void FOFNToList(std::string &fofnFileName,
std::vector<std::string> &fofnList);
static bool IsFOFN(std::string &fileName);
static bool IsBasH5(std::string &fileName);
static std::vector<std::string> Bas2Bax(std::string &basFN);
static int ExpandFileNameList(std::vector<std::string> &fileNames);
};
#endif
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