r-cran-genetics 1.3.6-2 / usr / lib / R / site-library / genetics / ChangeLog

2011-02-02 02:24  warnes

	* doc/genetics_article.pdf:
	  update
	  Greg's
	  email

2011-02-02 02:23  warnes

	* doc/genetics_article.pdf,
	  doc/genetics_article.tex:
	  update
	  Greg's
	  email

2011-01-17 19:13  warnes

	* trunk/genetics/DESCRIPTION,
	  NEWS,
	  trunk/genetics/man/HWE.chisq.Rd,
	  trunk/genetics/man/HWE.test.Rd,
	  trunk/genetics/man/diseq.Rd:
	  Correct
	  R
	  CMD
	  check
	  warnings.

2008-08-20 19:23  warnes

	* NEWS:
	  Update
	  news
	  file
	  to
	  note
	  new
	  regression
	  test

2008-08-20 19:06  warnes

	* trunk/genetics/DESCRIPTION,
	  NEWS:
	  Bump
	  version
	  numer
	  up
	  and
	  update
	  NEWS
	  file

2008-04-30 01:05  warnes

	* trunk/genetics/DESCRIPTION,
	  NEWS:
	  Update
	  for
	  version
	  1.3.3

2007-11-20 20:27  warnes

	* trunk/genetics/DESCRIPTION,
	  NEWS:
	  Update
	  NEWS
	  and
	  DESCRIPTION
	  for
	  genetics
	  1.3.2

2007-09-12 10:41  ggorjan

	* trunk/genetics/DESCRIPTION,
	  trunk/genetics/NAMESPACE,
	  trunk/genetics/R/genotype.R,
	  trunk/genetics/R/summary.genotype.R,
	  NEWS,
	  trunk/genetics/man/genotype.Rd:
	  -
	  fixes
	  in
	  genotypeOrder
	  to
	  ensure
	  all
	  genotype/haplotype
	  combinations
	  
	  are
	  used. -
	  genotypeOrder<-
	  is
	  now
	  exported

2007-08-21 14:36  warnes

	* trunk/genetics/NEWS,
	  NEWS:
	  Move
	  Changelog
	  (not
	  in
	  SVN)
	  and
	  NEWS
	  to
	  inst/

2007-08-21 14:35  warnes

	* ChangeLog,
	  NEWS:
	  Remove
	  softlinks
	  in
	  inst,
	  doesn't
	  work
	  on
	  windows

2007-08-20 18:30  warnes

	* ChangeLog,
	  NEWS:
	  Add
	  softlinks
	  in
	  inst
	  to
	  NEWS
	  and
	  ChangeLog
	  so
	  these
	  will
	  get
	  installed.

2006-11-14 22:20  ggorjan

	* trunk/GeneticsBase/DESCRIPTION,
	  trunk/GeneticsBase/R/convert.R,
	  trunk/GeneticsBase/TODO.txt,
	  trunk/GeneticsBase/data/ALZH.ped,
	  trunk/GeneticsBase/data/CAMP.ped,
	  trunk/GeneticsBase/data/CAMPZ.phe,
	  trunk/GeneticsBase/data/qtl.ped,
	  trunk/GeneticsBase/data/qtl.phe,
	  trunk/GeneticsBase/data/xbat.ped,
	  trunk/GeneticsBase/data/xbat.phe,
	  trunk/GeneticsBase/man/fastGrid.Rd,
	  trunk/GeneticsBase/man/makeMarkerInfo.Rd,
	  trunk/GeneticsBase/man/makeTransTable.Rd,
	  trunk/GeneticsBase/man/makeTransTableList.Rd,
	  trunk/GeneticsBase/src/convert.c,
	  trunk/PopGenetics/R/HWE.test.data.frame.R,
	  trunk/PopGenetics/R/expectedGenotypes.R,
	  trunk/PopGenetics/R/plot.genotype.R,
	  trunk/PopGenetics/inst/doc/example_data.csv,
	  trunk/PopGenetics/man/expectedGenotypes.Rd,
	  trunk/PopGenetics/man/plot.genotype.Rd,
	  trunk/fbat/DESCRIPTION,
	  trunk/fbat/data/CAMP.ped,
	  trunk/genetics/R/HWE.test.data.frame.R,
	  trunk/genetics/R/expectedGenotypes.R,
	  trunk/genetics/R/plot.genotype.R,
	  doc/example_data.csv,
	  trunk/genetics/man/expectedGenotypes.Rd,
	  trunk/genetics/man/plot.genotype.Rd:
	  Removing
	  executable
	  property

2006-11-11 04:09  warnes

	* trunk/genetics/DESCRIPTION,
	  doc/genetics_article.tex,
	  trunk/genetics/man/HWE.exact.Rd,
	  trunk/genetics/man/HWE.test.Rd,
	  trunk/genetics/man/LD.Rd,
	  trunk/genetics/man/binsearch.Rd,
	  trunk/genetics/man/ci.balance.Rd,
	  trunk/genetics/man/diseq.Rd,
	  trunk/genetics/man/genotype.Rd,
	  trunk/genetics/man/gregorius.Rd,
	  trunk/genetics/man/homozygote.Rd,
	  trunk/genetics/man/locus.Rd,
	  trunk/genetics/man/makeGenotypes.Rd,
	  trunk/genetics/man/print.LD.Rd,
	  trunk/genetics/man/summary.genotype.Rd,
	  trunk/genetics/man/write.pop.file.Rd:
	  Update
	  my
	  email
	  address

2004-12-23 01:34  warnes

	* trunk/genetics/R/HWE.test.data.frame.R,
	  doc/LD.pdf,
	  doc/example_data.csv,
	  doc/genetics_article.pdf:
	  Check
	  in
	  some
	  files
	  that
	  seem
	  to
	  have
	  been
	  overlooked
	  in
	  the
	  past.

2003-05-29 02:27  warnesgr

	* doc/genetics_article.tex:
	  -
	  added
	  ld
	  to
	  conclusion
	  text

2003-05-29 02:23  warnesgr

	* doc/genetics_article.tex:
	  Updated
	  for
	  version
	  1.0.0

2003-05-29 02:20  warnesgr

	* doc/genetics_article.tex:
	  -
	  Final
	  version
	  to
	  send
	  to
	  Fritz.

2003-05-29 01:55  warnesgr

	* doc/example.R,
	  doc/genetics_article.tex,
	  doc/make_example_data.R:
	  -
	  
	  Add
	  R
	  code
	  to
	  generate
	  and
	  demo
	  genetics
	  package

2003-05-16 18:39  warnesgr

	* trunk/genetics/DESCRIPTION,
	  trunk/genetics/R/makeGenotypes.R,
	  doc/Rnews.sty,
	  doc/genetics_article.tex,
	  trunk/genetics/man/makeGenotypes.Rd:
	  -
	  Updated
	  to
	  version
	  0.7.0 -
	  Made
	  changes
	  to
	  pass
	  R
	  CMD
	  check

2003-02-03 16:13  warnesgr

	* trunk/genetics/DESCRIPTION,
	  doc/genetics_article.tex,
	  trunk/genetics/man/HWE.exact.Rd,
	  trunk/genetics/man/binsearch.Rd,
	  trunk/genetics/man/gregorius.Rd:
	  -
	  Fixed
	  typos
	  and
	  R
	  CMD
	  check
	  warnings. -
	  Updated
	  version
	  number -
	  Removed
	  'data'
	  directory
	  to
	  fix
	  new
	  R
	  CMD
	  check
	  warning.

2002-11-27 15:32  warnesgr

	* trunk/genetics/DESCRIPTION,
	  trunk/genetics/R/HWE.test.R,
	  trunk/genetics/R/diseq.R,
	  trunk/genetics/R/genotype.R,
	  trunk/genetics/TODO,
	  doc/genetics_article.tex,
	  trunk/genetics/man/HWE.test.Rd,
	  trunk/genetics/man/ci.balance.Rd,
	  trunk/genetics/man/diseq.Rd,
	  trunk/genetics/man/genotype.Rd,
	  trunk/genetics/man/locus.Rd,
	  trunk/genetics/man/summary.genotype.Rd,
	  trunk/genetics/man/undocumented.Rd:
	  Correct
	  spelling
	  errors
	  and
	  typos.

2002-06-27 18:46  warnesgr

	* doc/genetics_article.tex:
	  -
	  More
	  revisions.
	  
	  Hopefully
	  last
	  set
	  before
	  submission
	  to
	  publication
	  
	  review.

2002-06-25 21:38  warnesgr

	* doc/genetics_article.tex:
	  -
	  Fixed
	  syntax
	  errors -
	  Some
	  reorganization

2002-06-19 10:34  warnesgr

	* doc/genetics_article.tex:
	  Much
	  enhancement,
	  including
	  addition
	  of
	  example
	  section.

2002-04-09 00:49  warneg

	* .,
	  doc,
	  doc/Rnews.sty,
	  doc/genetics_article.tex:
	  -
	  Initial
	  checkin
	  of
	  article
	  sources