This file is indexed.

/usr/lib/python2.7/dist-packages/sardana/spock/spockms.py is in python-sardana 1.2.0-2.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
#!/usr/bin/env python
# -*- coding: utf-8 -*-

##############################################################################
##
## This file is part of Sardana
##
## http://www.tango-controls.org/static/sardana/latest/doc/html/index.html
##
## Copyright 2011 CELLS / ALBA Synchrotron, Bellaterra, Spain
##
## Sardana is free software: you can redistribute it and/or modify
## it under the terms of the GNU Lesser General Public License as published by
## the Free Software Foundation, either version 3 of the License, or
## (at your option) any later version.
##
## Sardana is distributed in the hope that it will be useful,
## but WITHOUT ANY WARRANTY; without even the implied warranty of
## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
## GNU Lesser General Public License for more details.
##
## You should have received a copy of the GNU Lesser General Public License
## along with Sardana.  If not, see <http://www.gnu.org/licenses/>.
##
##############################################################################

"""This package provides the spock macroserver connectivity"""

__all__ = ['GUIViewer', 'SpockBaseDoor', 'QSpockDoor', 'SpockDoor',
           'SpockMacroServer']

import os

import PyTango

from taurus.core import TaurusEventType, TaurusSWDevState

from sardana.sardanautils import is_pure_str, is_non_str_seq
import genutils
from .inputhandler import SpockInputHandler, InputHandler

CHANGE_EVTS = TaurusEventType.Change, TaurusEventType.Periodic


if genutils.get_gui_mode() == 'qt':
    from taurus.qt.qtcore.tango.sardana.macroserver import QDoor, QMacroServer
    BaseDoor = QDoor
    BaseMacroServer = QMacroServer
    BaseGUIViewer = object
else:
    from taurus.core.tango.sardana.macroserver import BaseDoor, BaseMacroServer
    BaseGUIViewer = object


class GUIViewer(BaseGUIViewer):

    def __init__(self, door=None):
        BaseGUIViewer.__init__(self)
        self._door = door

    def run(self):
        self.plot()

    def show_scan(self, scan_nb=None, scan_history_info=None, directory_map=None):
        if scan_nb is None and scan_history_info is None:
            #===================================================================
            ##Hack to avoid ipython-qt issues. See similar workaround in expconf magic command
            ## @todo: do this in a better way
            #import taurus.qt.qtgui.plot
            #w = taurus.qt.qtgui.plot.TaurusTrend()
            #w.model = "scan://" + self._door.getNormalName()
            #w.show()
            import subprocess
            args = ['taurustrend','scan://%s'%self._door.getNormalName()]
            subprocess.Popen(args)
            #===================================================================
            return

        scan_dir, scan_file = None, None
        if scan_nb is None:
            for scan in reversed(scan_history_info):
                scan_dir = scan.get('ScanDir')
                scan_file = scan.get('ScanFile')
                if scan_dir is None or scan_file is None:
                    continue
                if not isinstance(scan_file, (str, unicode)):
                    scan_file = scan_file[0]
                break
            else:
                print "Cannot plot scan:"
                print "No scan in scan history was saved into a file"
                return
        else:
            for scan in reversed(scan_history_info):
                if scan['serialno'] == scan_nb:
                    scan_dir = scan.get('ScanDir')
                    scan_file = scan.get('ScanFile')
                    if scan_dir is None or scan_file is None:
                        print "Cannot plot scan:"
                        print "Scan %d was not saved into a file" % (scan_nb,)
                        return
                    if not isinstance(scan_file, (str, unicode)):
                        scan_file = scan_file[0]
                    break
            else:
                print "Cannot plot scan:"
                print "Scan %d not found in scan history" % (scan_nb,)
                return

        remote_file = os.path.join(scan_dir, scan_file)

        locations = [scan_dir]
        local_file = None
        if directory_map is None or not scan_dir in directory_map:
            if os.path.isdir(scan_dir):
                if scan_file in os.listdir(scan_dir):
                    local_file = remote_file
        else:
            local_directories = directory_map[scan_dir]
            if isinstance(scan_file, (str, unicode)):
                local_directories = [local_directories]
            locations = local_directories
            if scan_dir not in locations: locations.append(scan_dir)
            for local_directory in local_directories:
                if os.path.isdir(local_directory):
                    if scan_file in os.listdir(local_directory):
                        local_file = os.path.join(local_directory, scan_file)
                        break
        if local_file is None:
            print "Cannot plot scan:"
            print "Could not find %s in any of the following locations:" % (scan_file,)
            print "\n".join(locations)
            return

        import taurus.qt.qtgui.extra_nexus
        taurus_nexus_widget = taurus.qt.qtgui.extra_nexus.TaurusNeXusBrowser()
        taurus_nexus_widget.setMinimumSize(800, 600)

        print "Trying to open local scan file %s..." % (local_file,)
        taurus_nexus_widget.openFile(local_file)
        taurus_nexus_widget.show()
        nexus_widget = taurus_nexus_widget.neXusWidget()
        entry_name = "entry%d" % scan["serialno"]
        measurement_name = "%s/measurement" % entry_name
        title_name = "%s/title" % entry_name
        windowTitle = scan_file + "[" + entry_name + "]"

        try:
            #entry_index = taurus_nexus_widget.findNodeIndex(local_file, entry_name)
            measurement_index = taurus_nexus_widget.findNodeIndex(local_file, measurement_name)
            #nexus_widget.setRootIndex(entry_index)
            nexus_widget.setCurrentIndex(measurement_index)
            nexus_widget.expand(measurement_index)
            title_index = taurus_nexus_widget.findNodeIndex(local_file, title_name)
            file_model = nexus_widget.model()
            title = file_model.getNodeFromIndex(title_index)[0]
            windowTitle += " - " + title
        except Exception, e:
            print "Cannot plot scan:"
            print str(e)

        taurus_nexus_widget.setWindowTitle(windowTitle)

    def plot(self):
        try:
            import sps
        except:
            print 'sps module not available. No plotting'
            return

        try:
            import pylab
        except:
            print "pylab not available (try running 'spock -pylab'). No plotting"
            return

        door = genutils.get_door()

        try:
            env = dict(door.getEnvironmentObj().read().value)
        except Exception,e:
            print 'Unable to read environment. No plotting'
            print str(e)
            return

        program = door.getNormalName().replace('/','').replace('_','')
        try:
            array = env['ActiveMntGrp'].replace('/','').replace('_','').upper() + "0D"
            array_ENV = '%s_ENV' % array
        except:
            print 'ActiveMntGrp not defined. No plotting'
            return

        if not program in sps.getspeclist():
            print '%s not found. No plotting' % program
            return

        if not array in sps.getarraylist(program):
            print '%s not found in %s. No plotting' % (array, program)
            return

        if not array_ENV in sps.getarraylist(program):
            print '%s not found in %s. No plotting' % (array_ENV, program)
            return

        try:
            mem = sps.attach(program, array)
            mem_ENV = sps.attach(program, array_ENV)
        except Exception, e:
            print 'sps.attach error: %s. No plotting' % str(e)
            return

        # reconstruct the environment
        i, env = 0, {}
        while mem_ENV[i][0] != '':
            line = mem_ENV[i].tostring()
            eq, end = line.index('='), line.index('\x00')
            k,v = line[:eq], line[eq+1:end]
            env[k] = v
            i += 1


        labels = env['axistitles'].split(' ')

        col_nb = len(labels)

        if col_nb < 4:
            print 'No data columns available in sps'
            return

        rows = int(env['nopts'])

        m = mem.transpose()

        x = m[1][:rows]
        colors = 'bgrcmyk'
        col_nb = min(col_nb, len(colors)+3)
        # skip point_nb, motor and timer columns
        for i in xrange(3,col_nb):
            y = m[i][:rows]
            line, = pylab.plot(x, y, label = labels[i])
            line.linestyle = '-'
            line.linewidth = 1
            line.color = colors[i-3]
        pylab.legend()


class SpockBaseDoor(BaseDoor):
    """A CLI version of the Door device"""

    console_editors = 'vi', 'vim', 'nano', 'joe', 'pico', 'emacs'

    Critical = 'Critical'
    Error = 'Error'
    Info = 'Info'
    Warning = 'Warning'
    Output = 'Output'
    Debug = 'Debug'
    Result = 'Result'
    RecordData = 'RecordData'

    MathFrontend = "matplotlib"

    def __init__(self, name, **kw):
        self._consoleReady = kw.get("consoleReady", False)
        if not kw.has_key('silent'): kw['silent'] = False
        self._lines = []
        self._spock_state = None
        self._plotter = GUIViewer(self)
        self.call__init__(BaseDoor, name, **kw)

    def create_input_handler(self):
        return SpockInputHandler(self)

    def get_color_mode(self):
        return genutils.get_color_mode()

    def _get_macroserver_for_door(self):
        ret = genutils.get_macro_server()
        return ret

    def _preprocessParameters(self, parameters):
        if is_pure_str(parameters):
            inside_str = False
            pars = []
            par = ''
            for c in parameters:
                if c == '"':
                    if inside_str:
                        inside_str = False
                        pars.append(par)
                        par = ''
                    else:
                        inside_str = True
                elif c == ' ':
                    if inside_str:
                        par += c
                    else:
                        pars.append(par)
                        par = ''
                else:
                    par += c
            if par: pars.append(par)
            return pars
        elif is_non_str_seq(parameters):
            return parameters

    def preRunMacro(self, obj, parameters):
        return BaseDoor.preRunMacro(self, obj, self._preprocessParameters(parameters))

    def runMacro(self, obj, parameters=[], synch=False):
        return BaseDoor.runMacro(self, obj, parameters=parameters, synch=synch)

    def _runMacro(self, xml, **kwargs):
        #kwargs like 'synch' are ignored in this re-implementation
        if self._spock_state != TaurusSWDevState.Running:
            print "Unable to run macro: No connection to door '%s'" % self.getSimpleName()
            raise Exception("Unable to run macro: No connection")
        if xml is None:
            xml = self.getRunningXML()
        kwargs['synch'] = True
        try:
            return BaseDoor._runMacro(self, xml, **kwargs)
        except KeyboardInterrupt:
            self.write('\nCtrl-C received: Stopping... ')
            self.block_lines = 0
            self.command_inout("StopMacro")
            self.writeln("Done!")
        except PyTango.DevFailed, e:
            if is_non_str_seq(e.args) and \
               not isinstance(e.args, (str, unicode)):
                reason, desc = e.args[0].reason, e.args[0].desc
                macro_obj = self.getRunningMacro()
                if reason == 'MissingParam':
                    print "Missing parameter:",desc
                    print macro_obj.getInfo().doc
                elif reason == 'WrongParam':
                    print "Wrong parameter:",desc
                    print macro_obj.getInfo().doc
                elif reason == 'UnkownParamObj':
                    print "Unknown parameter:",desc
                elif reason == 'MissingEnv':
                    print "Missing environment:",desc
                elif reason in ('API_CantConnectToDevice', 'API_DeviceNotExported'):
                    self._updateState(self._old_sw_door_state, TaurusSWDevState.Shutdown, silent=True)
                    print "Unable to run macro: No connection to door '%s'" % self.getSimpleName()
                else:
                    print "Unable to run macro:", reason, desc

    def _getMacroResult(self, macro):
        ret = None
        if macro.info.hasResult():
            ret = macro.getResult()

            if ret is None:
                return None

            if macro.info.getResult().type == 'File':

                commit_cmd = macro.info.hints['commit_cmd']

                if commit_cmd == None:
                    return ret

                local_f_name = ret[0]
                remote_f_name = ret[1]
                line_nb = ret[3]
                commit = CommitFile(commit_cmd, local_f_name, remote_f_name)
                self.pending_commits.update( { remote_f_name : commit } )
                ip = genutils.get_ipapi()
                editor = genutils.get_editor()

                cmd = 'edit -x -n %s %s' % (line_nb, local_f_name)
                if not editor in self.console_editors:
                    cmd = 'bg _ip.magic("' + cmd + '")'
                ip.magic(cmd)
                # The return value of the macro was saved in a file and opened
                # with edit so we don't return anything to avoid big outputs
                # to the console
                ret = None
        return ret

    def plot(self):
        self._plotter.run()

    def show_scan(self, scan_nb=None, online=False):
        if online:
            self._plotter.show_scan()
            return
        env = self.getEnvironment()
        scan_history_info = env.get("ScanHistory")
        directory_map = env.get("DirectoryMap")
        self._plotter.show_scan(scan_nb=scan_nb,
                                scan_history_info=scan_history_info,
                                directory_map=directory_map)

    def stateChanged(self, s, t, v):
        old_sw_state = self._old_sw_door_state
        BaseDoor.stateChanged(self, s, t, v)
        new_sw_state = self._old_sw_door_state
        self._updateState(old_sw_state, new_sw_state)

    def _updateState(self, old_sw_state, new_sw_state, silent=False):
        user_ns = genutils.get_ipapi().user_ns
        if new_sw_state == TaurusSWDevState.Running:
            user_ns['DOOR_STATE'] = ""
        else:
            user_ns['DOOR_STATE'] = " (OFFLINE)"

        if not self.isConsoleReady():
            self._spock_state = new_sw_state
            return

        ss = self._spock_state
        if ss is not None and ss != new_sw_state and not silent:
            if ss == TaurusSWDevState.Running:
                self.write_asynch("\nConnection to door '%s' was lost.\n" % self.getSimpleName())
            elif new_sw_state == TaurusSWDevState.Running:
                self.write_asynch("\nConnection to the door (%s) has " \
                    "been restablished\n" % self.getSimpleName())
        self._spock_state = new_sw_state

    def write_asynch(self, msg):
        self._lines.append(msg)

    def pre_prompt_hook(self, ip):
        self._flush_lines()

    def _flush_lines(self):
        for l in self._lines:
            self.write(l)
        self._lines = []

    def setConsoleReady(self, state):
        self._consoleReady = state

    def isConsoleReady(self):
        return self._consoleReady

    def write(self, msg, stream=None):
        if not self.isConsoleReady():
            return
        return BaseDoor.write(self, msg, stream=stream)

    def processRecordData(self, data):
        if data is None: return
        data = data[1]
        if data['type'] == 'function':
            func_name = data['func_name']
            if func_name.startswith("pyplot."):
                func_name = self.MathFrontend + "." + func_name
            args = data['args']
            kwargs = data['kwargs']
            
            members = func_name.split(".")
            mod_list, fname = members[:-1], members[-1]
            mod_name = ".".join(mod_list)
            if mod_name:
                mod = __import__(mod_name, fromlist=mod_list)
                func = getattr(mod, fname)
            else:
                func = __builtins__[fname]
            try:
                func(*args, **kwargs)
            except Exception as e:
                self.logReceived(self.Warning, ['Unable to execute %s: ' % func_name, str(e)])

    _RECORD_DATA_THRESOLD = 4*1024*1024 # 4Mb

    def _processRecordData(self, data):
        if data is None: return
        value = data.value
        size = len(value[1])
        if size > self._RECORD_DATA_THRESOLD:
            sizekb = size / 1024
            self.logReceived(self.Info, ['Received long data record (%d Kb)' % sizekb,
                'It may take some time to process. Please wait...'])
        return BaseDoor._processRecordData(self, data)
        

from taurus.qt import Qt

class QSpockDoor(SpockBaseDoor):

    def __init__(self, name, **kw):
        self.call__init__(SpockBaseDoor, name, **kw)
        
        Qt.QObject.connect(self, Qt.SIGNAL('recordDataUpdated'),
                           self.processRecordData)

    def recordDataReceived(self, s, t, v):
        if genutils.get_pylab_mode() == "inline":
            if t not in CHANGE_EVTS: return
            res = BaseDoor.recordDataReceived(self, s, t, v)
            self.processRecordData(res)
        else:
            res = SpockBaseDoor.recordDataReceived(self, s, t, v)
        return res
               
    def create_input_handler(self):
        return InputHandler()


class SpockDoor(SpockBaseDoor):

    def _processRecordData(self, data):
        data = SpockBaseDoor._processRecordData(self, data)
        return self.processRecordData(data)


class SpockMacroServer(BaseMacroServer):
    """A CLI version of the MacroServer device"""

    def __init__(self, name, **kw):
        self._local_magic = {}
        self._local_var = set()
        self.call__init__(BaseMacroServer, name, **kw)

    def on_elements_changed(self, evt_src, evt_type, evt_value):
        return BaseMacroServer.on_elements_changed(self, evt_src, evt_type,
                                                   evt_value)

    _SKIP_ELEMENTS = 'controller', 'motorgroup', 'instrument', \
        'controllerclass', 'controllerlib', 'macrolib'

    def _addElement(self, element_data):
        element = BaseMacroServer._addElement(self, element_data)
        elem_type = element.type
        if "MacroCode" in element.interfaces:
            self._addMacro(element)
        elif elem_type not in self.NO_CLASS_TYPES:
            # TODO: when it becomes possible to do:
            # some taurus.Device.<attr name> = <value>
            # replace device_proxy with element
            device_proxy = element.getObj().getHWObj()
            genutils.expose_variable(element.name, device_proxy)
        return element

    def _removeElement(self, element_data):
        element = BaseMacroServer._removeElement(self, element_data)
        elem_type = element.type
        if "MacroCode" in element.interfaces:
            self._removeMacro(element)
        elif elem_type not in self.NO_CLASS_TYPES:
            genutils.unexpose_variable(element.name)
        return element

    def _addMacro(self, macro_info):
        macro_name = str(macro_info.name)

        def macro_fn(shell, parameter_s='', name=macro_name):
            parameters = genutils.arg_split(parameter_s, posix=True)
            door = genutils.get_door()
            door.runMacro(macro_name, parameters, synch=True)
            macro = door.getLastRunningMacro()
            if macro is not None: # maybe none if macro was aborted
                return macro.getResult()

        macro_fn.func_name = macro_name
        macro_fn.__doc__ = macro_info.doc

        # register magic command
        genutils.expose_magic(macro_name, macro_fn)
        self._local_magic[macro_name] = macro_fn

        return macro_info

    def _removeMacro(self, macro_info):
        macro_name = macro_info.name
        genutils.unexpose_magic(macro_name)
        del self._local_magic[macro_name]