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#!/usr/bin/env r
#
# a simple example to install one or more packages

## load getopt package from CRAN, or stop if getopt not available
stopifnot(require(getopt, quiet=TRUE))

## default values
repos <- "http://cran.us.r-project.org"		# us mirror
lib.loc <- "/usr/local/lib/R/site-library"	# this makes sense on Debian where no packages touch /usr/local
package <- ""

## option specification
options <- matrix(c('repos',   'r', 1, "character", paste("repository to install from:\n\t\t\t ", repos),
                    'libloc',  'l', 1, "character", paste("library location to use:\n\t\t\t", lib.loc),
                    'help'   , 'h', 0, "logical", "help on options",
                    'package', 'p', 1, "character", "mandatory argument for package to install"),
                  ncol=5,
                  byrow=TRUE)

## parse argv
opt <- getopt(options, opt=argv)

if (!is.null(opt$help)) {
    ## use default text
    cat(getopt(options, opt=argv, command="install.r", usage=TRUE))
    q(status=100)
}

repos   <- ifelse(is.null(opt$repos), repos, opt$repos)
lib.loc <- ifelse(is.null(opt$libloc), lib.loc, opt$libloc)
package <- ifelse(is.null(opt$package), package, opt$package)

if (nchar(package)==0) {
    cat("No package argument supplied, exitiing.  See 'install.r -h|--help' for usage.\n")
    q(status=101)
}

#args(install.packages)
#function (pkgs, lib, repos = getOption("repos"),
#          contriburl = contrib.url(repos, type),
#          method, available = NULL, destdir = NULL,
#          installWithVers = FALSE,
#          dependencies = FALSE, type = getOption("pkgType"),
#          configure.args = character(0),
#          clean = FALSE)
install.packages(package, lib.loc, repos, dependencies=TRUE)
q(status=0)