This file is indexed.

/usr/include/deal.II/base/parsed_function.h is in libdeal.ii-dev 8.1.0-6ubuntu1.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
// ---------------------------------------------------------------------
// $Id: parsed_function.h 31891 2013-12-05 00:34:40Z maier $
//
// Copyright (C) 2007 - 2013 by the deal.II authors
//
// This file is part of the deal.II library.
//
// The deal.II library is free software; you can use it, redistribute
// it, and/or modify it under the terms of the GNU Lesser General
// Public License as published by the Free Software Foundation; either
// version 2.1 of the License, or (at your option) any later version.
// The full text of the license can be found in the file LICENSE at
// the top level of the deal.II distribution.
//
// ---------------------------------------------------------------------


#ifndef __deal2__parsed_function_h
#define __deal2__parsed_function_h

#include <deal.II/base/auto_derivative_function.h>
#include <deal.II/base/function_parser.h>
#include <deal.II/base/parameter_handler.h>

DEAL_II_NAMESPACE_OPEN

namespace Functions
{
  /**
   *   Friendly interface to the FunctionParser class. This class is
   *   meant as a wrapper for the FunctionParser class. It is used in the
   *   step-34 tutorial program.
   *
   *   It provides two
   *   methods to declare and parse a ParameterHandler object and creates
   *   the Function object declared in the parameter file. This class is
   *   derived from the AutoDerivativeFunction class, so you don't need
   *   to specify derivatives. An example of usage of this class is as follows:
   *
   *   @code
   *   // A parameter handler
   *   ParameterHandler prm;
   *
   *   // Declare a section for the function we need
   *   prm.enter_subsection("My vector function");
   *   ParsedFunction<dim>::declare_parameters(prm, dim);
   *   prm.leave_subsection();
   *
   *   // Create a ParsedFunction
   *   ParsedFunction<dim> my_vector_function(dim);
   *
   *   // Parse an input file.
   *   prm.read_input(some_input_file);
   *
   *   // Initialize the ParsedFunction object with the given file
   *   prm.enter_subsection("My vector function");
   *   my_vector_function.parse_parameters(prm);
   *   prm.leave_subsection();
   *
   *   @endcode
   *
   *   And here is an example of how the input parameter could look like
   *   (see the documentation of the FunctionParser class for a detailed
   *   description of the syntax of the function definition):
   *
   *   @code
   *
   *   # A test two dimensional vector function, depending on time
   *   subsection My vector function
   *   set Function constants  = kappa=.1, lambda=2.
   *   set Function expression = if(y>.5, kappa*x*(1-x),0); t^2*cos(lambda*pi*x)
   *   set Variable names      = x,y,t
   *   end
   *
   *   @endcode
   *
   *   @ingroup functions
   *   @author Luca Heltai, 2006
   */
  template <int dim>
  class ParsedFunction :  public AutoDerivativeFunction<dim>
  {
  public:
    /**
     * Construct a vector
     * function. The vector
     * function which is generated
     * has @p n_components
     * components (defaults to
     * 1). The parameter @p h is
     * used to initialize the
     * AutoDerivativeFunction class
     * from which this class is
     * derived.
     */
    ParsedFunction (const unsigned int n_components = 1, const double h=1e-8);

    /**
     * Declare parameters needed by
     * this class. The additional
     * parameter @p n_components is
     * used to generate the right
     * code according to the number
     * of components of the
     * function that will parse
     * this ParameterHandler. If
     * the number of components
     * which is parsed does not
     * match the number of
     * components of this object,
     * an assertion is thrown and
     * the program is aborted.  The
     * default behavior for this
     * class is to declare the
     * following entries:
     *
     *  @code
     *
     *  set Function constants  =
     *  set Function expression = 0
     *  set Variable names      = x,y,t
     *
     *  @endcode
     *
     */
    static void declare_parameters(ParameterHandler &prm,
                                   const unsigned int n_components = 1);

    /**
     * Parse parameters needed by
     * this class.  If the number
     * of components which is
     * parsed does not match the
     * number of components of this
     * object, an assertion is
     * thrown and the program is
     * aborted.  In order for the
     * class to function properly,
     * we follow the same
     * convenctions declared in the
     * FunctionParser class (look
     * there for a detailed
     * description of the syntax
     * for function declarations).
     *
     * The three variables that can
     * be parsed from a parameter
     * file are the following:
     *
     *  @code
     *
     *  set Function constants  =
     *  set Function expression =
     *  set Variable names      =
     *
     *  @endcode
     *
     *  Function constants is a
     *  collection of pairs in the
     *  form name=value, separated
     *  by commas, for example:
     *
     *  @code
     *
     *  set Function constants = lambda=1., alpha=2., gamma=3.
     *
     *  @endcode
     *
     *  These constants can be used
     *  in the declaration of the
     *  function expression, which
     *  follows the convention of
     *  the FunctionParser
     *  class. In order to specify
     *  vector functions,
     *  semicolons have to be used
     *  to separate the different
     *  components, e.g.:
     *
     *  @code
     *
     *  set Function expression = cos(pi*x) ; cos(pi*y)
     *
     *  @endcode
     *
     *  The variable names entry
     *  can be used to customize
     *  the name of the variables
     *  used in the Function. It
     *  defaults to
     *
     *  @code
     *
     *  set Variable names      = x,t
     *
     *  @endcode
     *
     *  for one dimensional problems,
     *
     *  @code
     *
     *  set Variable names      = x,y,t
     *
     *  @endcode
     *
     *  for two dimensional problems and
     *
     *  @code
     *
     *  set Variable names      = x,y,z,t
     *
     *  @endcode
     *
     *  for three dimensional problems.
     *
     *  The time variable can be
     *  set according to
     *  specifications in the
     *  FunctionTime base class.
     */
    void parse_parameters(ParameterHandler &prm);

    /**
     * Return all components of a
     * vector-valued function at the
     * given point @p p.
     */
    virtual void vector_value (const Point<dim> &p,
                               Vector<double>   &values) const;

    /**
     * Return the value of the
     * function at the given
     * point. Unless there is only
     * one component (i.e. the
     * function is scalar), you
     * should state the component
     * you want to have evaluated;
     * it defaults to zero,
     * i.e. the first component.
     */
    virtual double value (const Point< dim >     &p,
                          const unsigned int  component = 0)    const;

    /**
     * Set the time to a specific
     * value for time-dependent
     * functions.
     *
     * We need to overwrite this to
     * set the time also in the
     * accessor
     * FunctionParser<dim>.
     */
    virtual void set_time(const double newtime);

  private:
    /**
     * The object with which we do
     * computations.
     */
    FunctionParser<dim> function_object;
  };
}

DEAL_II_NAMESPACE_CLOSE

#endif