/usr/lib/R/site-library/phyloseq/extdata/usearch.uc is in r-bioc-phyloseq 1.22.3-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 | H 320 211 99.5 - 0 0 257I211M971I D21.a.393001_3 FYIZYI001CNZEI orig_bc=ACATACGCGT new_bc=ACATACGCGT bc_diffs=0 4416570
H 416 211 97.6 - 0 0 320I211M1022I D21.5n.392974_5 FYIZYI001CTYEF orig_bc=TCGTCGCTCG new_bc=TCGTCGCTCG bc_diffs=0 4480244
H 424 211 99.1 - 0 0 247I81MI130M962I D11.b.392956_4 FYIZYI001EQ4DZ orig_bc=ATATCGCGAG new_bc=ATATCGCGAG bc_diffs=0 4483037
H 354 211 98.6 - 0 0 295I211M889I D18.6m.393070_9 FYIZYI001CKKSP orig_bc=TGTACTACTC new_bc=TGTACTACTC bc_diffs=0 4449518
H 420 211 97.2 - 0 0 286I172MD38M997I D20.393127_12 FYIZYI001CGO3M orig_bc=TAGAGACGAG new_bc=TAGAGACGAG bc_diffs=0 4481359
H 428 211 98.6 - 0 0 254I211M944I D27.393075_13 FYIZYI001CQWMO orig_bc=CAGTAGACGT new_bc=CAGTAGACGT bc_diffs=0 4484111
H 236 211 100.0 - 0 0 251I211M986I D13.5n.393036_15 FYIZYI001BLMDT orig_bc=CTCGCGTGTC new_bc=CTCGCGTGTC bc_diffs=0 4226619
H 419 211 98.6 - 0 0 253I211M959I D2.393107_21 FYIZYI001CNI99 orig_bc=TACTCTCGTG new_bc=TACTCTCGTG bc_diffs=0 4481131
H 297 211 100.0 - 0 0 283I211M933I D19.a.393146_19 FYIZYI001C0CZP orig_bc=CGTAGACTAG new_bc=CGTAGACTAG bc_diffs=0 4381553
H 402 211 97.2 - 0 0 262I177MI34M965I D31.393093_22 FYIZYI001BNJ2B orig_bc=TACGCTGTCT new_bc=TACGCTGTCT bc_diffs=0 4475642
H 296 211 99.1 - 0 0 240I211M970I D13.a.393151_27 FYIZYI001EYIF0 orig_bc=TAGTATCAGC new_bc=TAGTATCAGC bc_diffs=0 4381430
H 354 211 98.1 - 0 0 294I9MI202M889I D10.b.393074_24 FYIZYI001BY1Z0 orig_bc=AGCACTGTAG new_bc=AGCACTGTAG bc_diffs=0 4449518
N * * * . * * * D15.b.393025_8 FYIZYI001BLWUY orig_bc=CGAGAGATAC new_bc=CGAGAGATAC bc_diffs=0 *
N * * * . * * * D19.b.393086_17 FYIZYI001BNM56 orig_bc=TACGAGTATG new_bc=TACGAGTATG bc_diffs=0 *
H 417 211 99.1 - 0 0 262I160MI51M969I D19.a.393146_25 FYIZYI001EKPWO orig_bc=CGTAGACTAG new_bc=CGTAGACTAG bc_diffs=0 4480359
N * * * . * * * D11.b.392956_23 FYIZYI001EQLMG orig_bc=ATATCGCGAG new_bc=ATATCGCGAG bc_diffs=0 *
H 421 211 98.6 - 0 0 262I211M957I D10.5n.393082_28 FYIZYI001C0C4Q orig_bc=ACGCTCGACA new_bc=ACGCTCGACA bc_diffs=0 4481719
H 377 211 99.5 - 0 0 257I211M977I D2.393107_30 FYIZYI001D191N orig_bc=TACTCTCGTG new_bc=TACTCTCGTG bc_diffs=0 4463709
H 428 211 97.7 - 0 0 253I102MI30MI41MD37M944I D15.5n.393148_31 FYIZYI001CPTB3 orig_bc=TACTGAGCTA new_bc=TACTGAGCTA bc_diffs=0 4484111
H 424 211 100.0 - 0 0 248I211M962I D16.b.393030_32 FYIZYI001ELLNF orig_bc=TCACGTACTA new_bc=TCACGTACTA bc_diffs=0 4483037
H 388 211 99.5 - 0 0 281I211M944I D17.392970_33 FYIZYI001E1URB orig_bc=CGTCTAGTAC new_bc=CGTCTAGTAC bc_diffs=0 4468234
H 419 211 98.6 - 0 0 253I211M959I D1.393095_34 FYIZYI001BP0UJ orig_bc=ACGAGTGCGT new_bc=ACGAGTGCGT bc_diffs=0 4481131
H 419 211 97.6 - 0 0 255I68MD8MD133M959I D13.a.393151_35 FYIZYI001EP8YM orig_bc=TAGTATCAGC new_bc=TAGTATCAGC bc_diffs=0 4481131
H 297 211 99.5 - 0 0 284I8MD202M933I D26.392975_47 FYIZYI001EYIA0 orig_bc=CACGCTACGT new_bc=CACGCTACGT bc_diffs=0 4381553
H 419 211 98.6 - 0 0 255I77MD17MD115M959I D2.393107_40 FYIZYI001C79G7 orig_bc=TACTCTCGTG new_bc=TACTCTCGTG bc_diffs=0 4481131
H 421 211 99.1 - 0 0 262I211M957I D23.392960_44 FYIZYI001C0F4N orig_bc=AGACTATACT new_bc=AGACTATACT bc_diffs=0 4481719
N * * * . * * * D18.6m.393070_6 FYIZYI001BSDZT orig_bc=TGTACTACTC new_bc=TGTACTACTC bc_diffs=0 *
H 388 211 100.0 - 0 0 281I211M944I D11.a.392963_48 FYIZYI001EVLXY orig_bc=ATCAGACACG new_bc=ATCAGACACG bc_diffs=0 4468234
H 428 211 98.1 - 0 0 255I173MD37M944I D16.a.393131_38 FYIZYI001EF2LA orig_bc=ATACGACGTA new_bc=ATACGACGTA bc_diffs=0 4484111
H 315 211 97.2 - 0 0 248I160MI51M986I D15.5n.393148_36 FYIZYI001CPH7M orig_bc=TACTGAGCTA new_bc=TACTGAGCTA bc_diffs=0 4412540
H 419 211 98.6 - 0 0 253I211M959I D21.a.393001_54 FYIZYI001CFHC4 orig_bc=ACATACGCGT new_bc=ACATACGCGT bc_diffs=0 4481131
H 180 211 97.6 - 0 0 226I75MD95MD39M952I D2.393107_49 FYIZYI001B14Y3 orig_bc=TACTCTCGTG new_bc=TACTCTCGTG bc_diffs=0 2232355
H 354 211 98.6 - 0 0 295I211M889I D21.b.393031_50 FYIZYI001E0FZ4 orig_bc=ACGCGAGTAT new_bc=ACGCGAGTAT bc_diffs=0 4449518
H 200 211 98.1 - 0 0 269I177MI34M954I D21.5n.392974_53 FYIZYI001ERQIR orig_bc=TCGTCGCTCG new_bc=TCGTCGCTCG bc_diffs=0 3154070
H 337 211 98.6 - 0 0 244I51MD26MD19MI113M973I D24.393019_55 FYIZYI001CNZ0K orig_bc=AGTACGCTAT new_bc=AGTACGCTAT bc_diffs=0 4437368
H 424 211 99.5 - 0 0 249I77MD133M962I D19.b.393086_52 FYIZYI001ES8M6 orig_bc=TACGAGTATG new_bc=TACGAGTATG bc_diffs=0 4483037
N * * * . * * * D12.392988_51 FYIZYI001EYE44 orig_bc=CGTGTCTCTA new_bc=CGTGTCTCTA bc_diffs=0 *
H 421 211 99.1 - 0 0 262I211M957I D21.a.393001_58 FYIZYI001B7A6L orig_bc=ACATACGCGT new_bc=ACATACGCGT bc_diffs=0 4481719
H 350 211 98.1 - 0 0 269I177MI34M956I D15.b.393025_57 FYIZYI001EX2HO orig_bc=CGAGAGATAC new_bc=CGAGAGATAC bc_diffs=0 4447950
H 272 211 99.1 - 0 0 281I211M877I D16.a.393131_63 FYIZYI001B319H orig_bc=ATACGACGTA new_bc=ATACGACGTA bc_diffs=0 619817
H 52 211 99.1 - 0 0 261I211M1008I D11.a.392963_62 FYIZYI001D7ZJ9 orig_bc=ATCAGACACG new_bc=ATCAGACACG bc_diffs=0 269386
H 350 211 97.6 - 0 0 269I177MI34M956I D17.392970_60 FYIZYI001CQCCL orig_bc=CGTCTAGTAC new_bc=CGTCTAGTAC bc_diffs=0 4447950
H 419 211 98.6 - 0 0 253I211M959I D3.393129_66 FYIZYI001CGPI0 orig_bc=TACACGTGAT new_bc=TACACGTGAT bc_diffs=0 4481131
N * * * . * * * D21.5n.392974_43 FYIZYI001B1B5X orig_bc=TCGTCGCTCG new_bc=TCGTCGCTCG bc_diffs=0 *
H 419 211 98.6 - 0 0 253I211M959I D22.5n.393054_72 FYIZYI001B41NB orig_bc=ACTGTACAGT new_bc=ACTGTACAGT bc_diffs=0 4481131
H 121 211 99.1 - 0 0 262I90MD86MI34M895I D21.a.393001_64 FYIZYI001C6RLV orig_bc=ACATACGCGT new_bc=ACATACGCGT bc_diffs=0 174337
H 121 211 99.1 - 0 0 262I90MD86MI34M895I D22.393118_67 FYIZYI001BV2N4 orig_bc=ACTACTATGT new_bc=ACTACTATGT bc_diffs=0 174337
H 67 211 98.6 - 0 0 293I211M992I D18.6m.393070_70 FYIZYI001EWXE9 orig_bc=TGTACTACTC new_bc=TGTACTACTC bc_diffs=0 215097
H 276 211 99.5 - 0 0 282I143MI68M933I D22.393118_59 FYIZYI001CVL1U orig_bc=ACTACTATGT new_bc=ACTACTATGT bc_diffs=0 4358723
H 118 211 99.5 - 0 0 284I211M894I D20.393127_79 FYIZYI001CMKWC orig_bc=TAGAGACGAG new_bc=TAGAGACGAG bc_diffs=0 175279
H 121 211 99.5 - 0 0 261I177MI34M895I D2.393107_74 FYIZYI001E0128 orig_bc=TACTCTCGTG new_bc=TACTCTCGTG bc_diffs=0 174337
H 424 211 100.0 - 0 0 248I211M962I D19.a.393146_78 FYIZYI001ECT9S orig_bc=CGTAGACTAG new_bc=CGTAGACTAG bc_diffs=0 4483037
H 350 211 98.1 - 0 0 269I177MI34M956I D13.a.393151_73 FYIZYI001BPHT0 orig_bc=TAGTATCAGC new_bc=TAGTATCAGC bc_diffs=0 4447950
H 350 211 97.7 - 0 0 268I144MI26MI41M956I D13.b.393109_77 FYIZYI001CIMAS orig_bc=TCTCTATGCG new_bc=TCTCTATGCG bc_diffs=0 4447950
H 307 211 98.6 - 0 0 276I10MD166MI34M954I D15.a.392972_76 FYIZYI001CXV9P orig_bc=CATAGTAGTG new_bc=CATAGTAGTG bc_diffs=0 4401375
H 379 211 100.0 - 0 0 256I211M896I D1.393095_84 FYIZYI001CU1AD orig_bc=ACGAGTGCGT new_bc=ACGAGTGCGT bc_diffs=0 4465746
H 388 211 100.0 - 0 0 281I211M944I D21.5n.392974_80 FYIZYI001EX5NI orig_bc=TCGTCGCTCG new_bc=TCGTCGCTCG bc_diffs=0 4468234
H 352 211 97.6 - 0 0 265I211M962I D29.393071_87 FYIZYI001CNMM0 orig_bc=TACACACACT new_bc=TACACACACT bc_diffs=0 4448492
H 421 211 98.6 - 0 0 262I211M957I D14.393072_81 FYIZYI001B1IQ2 orig_bc=TGATACGTCT new_bc=TGATACGTCT bc_diffs=0 4481719
H 354 211 98.1 - 0 0 294I9MI202M889I D22.393118_83 FYIZYI001B40WY orig_bc=ACTACTATGT new_bc=ACTACTATGT bc_diffs=0 4449518
H 121 211 99.5 - 0 0 261I177MI34M895I D27.393075_82 FYIZYI001CEE2P orig_bc=CAGTAGACGT new_bc=CAGTAGACGT bc_diffs=0 174337
H 121 211 99.1 - 0 0 261I177MI34M895I D26.392975_89 FYIZYI001EWXH6 orig_bc=CACGCTACGT new_bc=CACGCTACGT bc_diffs=0 174337
H 350 211 98.1 - 0 0 269I177MI34M956I D10.5n.393082_86 FYIZYI001EZG8Q orig_bc=ACGCTCGACA new_bc=ACGCTCGACA bc_diffs=0 4447950
H 297 211 97.2 - 0 0 280I12MI132MI42MI25M933I D10.b.393074_85 FYIZYI001CW3N2 orig_bc=AGCACTGTAG new_bc=AGCACTGTAG bc_diffs=0 4381553
H 388 211 100.0 - 0 0 281I211M944I D20.393127_93 FYIZYI001B06HR orig_bc=TAGAGACGAG new_bc=TAGAGACGAG bc_diffs=0 4468234
H 67 211 99.1 - 0 0 293I211M992I D26.392975_91 FYIZYI001E2TAL orig_bc=CACGCTACGT new_bc=CACGCTACGT bc_diffs=0 215097
H 421 211 98.6 - 0 0 262I211M957I D16.b.393030_90 FYIZYI001DLIP0 orig_bc=TTACGTACTA new_bc=TCACGTACTA bc_diffs=1 4481719
H 388 211 100.0 - 0 0 281I211M944I D19.b.393086_98 FYIZYI001B020X orig_bc=TACGAGTATG new_bc=TACGAGTATG bc_diffs=0 4468234
H 379 211 99.5 - 0 0 255I201MI10M896I D12.392988_99 FYIZYI001EY4UF orig_bc=CGTGTCTCTA new_bc=CGTGTCTCTA bc_diffs=0 4465746
H 246 211 97.6 - 0 0 273I77MD133M1000I D19.a.393146_95 FYIZYI001B0J90 orig_bc=CGTAGACTAG new_bc=CGTAGACTAG bc_diffs=0 4308637
H 354 211 98.6 - 0 0 295I211M889I D19.a.393146_97 FYIZYI001CTYTS orig_bc=CGTAGACTAG new_bc=CGTAGACTAG bc_diffs=0 4449518
H 350 211 98.1 - 0 0 269I177MI34M956I D22.5n.393054_96 FYIZYI001EPS5M orig_bc=ACTGTACAGT new_bc=ACTGTACAGT bc_diffs=0 4447950
H 428 211 97.2 - 0 0 255I173MD37M944I D13.5n.393036_100 FYIZYI001E1HSI orig_bc=CTCGCGTGTC new_bc=CTCGCGTGTC bc_diffs=0 4484111
H 419 211 98.6 - 0 0 253I211M959I D30.392996_94 FYIZYI001CZLJH orig_bc=TACAGATCGT new_bc=TACAGATCGT bc_diffs=0 4481131
H 421 211 97.6 - 0 0 264I7MD168MD34M957I D14.393072_103 FYIZYI001CUDP6 orig_bc=TGATACGTCT new_bc=TGATACGTCT bc_diffs=0 4481719
H 354 211 98.6 - 0 0 295I211M889I D13.5n.393036_108 FYIZYI001CEUZ0 orig_bc=CTCGCGTGTC new_bc=CTCGCGTGTC bc_diffs=0 4449518
H 121 211 99.1 - 0 0 262I90MD86MI34M895I D31.393093_109 FYIZYI001B0AY7 orig_bc=TACGCTGTCT new_bc=TACGCTGTCT bc_diffs=0 174337
H 322 211 99.5 - 0 0 218I176MI35M950I D19.a.393146_106 FYIZYI001EC6BS orig_bc=CGTAGACTAG new_bc=CGTAGACTAG bc_diffs=0 4416951
H 388 211 99.1 - 0 0 279I144MI42MI25M944I D18.6m.393070_102 FYIZYI001CZX37 orig_bc=TGTACTACTC new_bc=TGTACTACTC bc_diffs=0 4468234
H 421 211 99.1 - 0 0 262I211M957I D22.5n.393054_111 FYIZYI001EY7NF orig_bc=ACTGTACAGT new_bc=ACTGTACAGT bc_diffs=0 4481719
H 419 211 98.6 - 0 0 253I211M959I D13.b.393109_110 FYIZYI001CQ5AR orig_bc=TCTCTATGCG new_bc=TCTCTATGCG bc_diffs=0 4481131
H 417 211 99.1 - 0 0 261I142MI15MI54M969I D10.5n.393082_113 FYIZYI001CQG96 orig_bc=ACGCTCGACA new_bc=ACGCTCGACA bc_diffs=0 4480359
H 348 211 99.1 - 0 0 267I144MI30MI37M962I D14.393072_112 FYIZYI001AZNVD orig_bc=TGATACGTCT new_bc=TGATACGTCT bc_diffs=0 4446898
H 388 211 100.0 - 0 0 281I211M944I D21.5n.392974_116 FYIZYI001EZT0I orig_bc=TCGTCGCTCG new_bc=TCGTCGCTCG bc_diffs=0 4468234
N * * * . * * * D13.5n.393036_101 FYIZYI001AJUVV orig_bc=CTCGCGTGTC new_bc=CTCGCGTGTC bc_diffs=0 *
H 421 211 98.6 - 0 0 261I143MI68M957I D14.393072_114 FYIZYI001BZEMP orig_bc=TGATACGTCT new_bc=TGATACGTCT bc_diffs=0 4481719
H 297 211 100.0 - 0 0 283I211M933I D10.a.393084_120 FYIZYI001BWLI0 orig_bc=AGACGCACTC new_bc=AGACGCACTC bc_diffs=0 4381553
H 388 211 100.0 - 0 0 281I211M944I D11.a.392963_122 FYIZYI001CPM06 orig_bc=ATCAGACACG new_bc=ATCAGACACG bc_diffs=0 4468234
H 420 211 97.2 - 0 0 286I172MD38M997I D13.b.393109_119 FYIZYI001EFI76 orig_bc=TCTCTATGCG new_bc=TCTCTATGCG bc_diffs=0 4481359
H 419 211 98.6 - 0 0 253I211M959I D1.393095_127 FYIZYI001C7QWM orig_bc=ACGAGTGCGT new_bc=ACGAGTGCGT bc_diffs=0 4481131
H 421 211 99.1 - 0 0 262I211M957I D28.393022_124 FYIZYI001D0O24 orig_bc=CGACGTGACT new_bc=CGACGTGACT bc_diffs=0 4481719
H 388 211 100.0 - 0 0 281I211M944I D11.a.392963_126 FYIZYI001C17CY orig_bc=ATCAGACACG new_bc=ATCAGACACG bc_diffs=0 4468234
H 421 211 99.1 - 0 0 262I211M957I D24.393019_128 FYIZYI001CW7C8 orig_bc=AGTACGCTAT new_bc=AGTACGCTAT bc_diffs=0 4481719
H 261 211 99.1 - 0 0 261I211M981I D21.a.393001_132 FYIZYI001DWUG5 orig_bc=ACATACGCGT new_bc=ACATACGCGT bc_diffs=0 4331364
H 388 211 100.0 - 0 0 281I211M944I D3.393129_130 FYIZYI001EX2KV orig_bc=TACACGTGAT new_bc=TACACGTGAT bc_diffs=0 4468234
H 320 211 97.6 - 0 0 257I211M971I D21.5n.392974_134 FYIZYI001DFZEH orig_bc=TCGTCGCTCG new_bc=TCGTCGCTCG bc_diffs=0 4416570
H 276 211 99.5 - 0 0 282I143MI68M933I D30.392996_125 FYIZYI001CAW20 orig_bc=TACAGATCGT new_bc=TACAGATCGT bc_diffs=0 4358723
H 350 211 98.1 - 0 0 269I177MI34M956I D13.b.393109_131 FYIZYI001EDVLU orig_bc=TCTCTATGCG new_bc=TCTCTATGCG bc_diffs=0 4447950
H 354 211 98.6 - 0 0 295I211M889I D19.5n.393000_136 FYIZYI001COL2A orig_bc=ACGACTACAG new_bc=ACGACTACAG bc_diffs=0 4449518
H 388 211 100.0 - 0 0 281I211M944I D28.393022_140 FYIZYI001CXW17 orig_bc=CGACGTGACT new_bc=CGACGTGACT bc_diffs=0 4468234
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